RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ATP6V1FQ16864 119 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 LILRB2Q8N423 598 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 TMEM252Q8N6L7 170 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 C5orf56Q8N8D9 126 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 OR1S2Q8NGQ3 325 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 FAM210AQ96ND0 272 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 ZNF702PQ9H963 129 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 PARP11Q9NR21 331 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 THYN1Q9P016 225 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 PLXNB1O43157 2135 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 RPS10-NUDT3A0A1W2PQS6 291 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 FAM24AA6NFZ4 105 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 ADARB2-AS1A8MUL3 147 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 H3BP45 60 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 FBXO24O75426 580 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 IFNA5P01569 189 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 ZNF266Q14584 549 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 ETFRF1Q6IPR1 90 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 TMUB2Q71RG4 321 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 SLC35E3Q7Z769 313 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 KCNRGQ8N5I3 272 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 OR11H4Q8NGC9 324 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 SCGB1C1Q8TD33 95 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 RBMXL1Q96E39 390 aaKnown RBP9.27□□□□□ -0.93
LDLR-212ENST00000560467 ARPC5LQ9BPX5 153 aa9.27□□□□□ -0.93
LDLR-212ENST00000560467 AP4M1O00189 453 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 SCGB2A1O75556 95 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 CST7O76096 145 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 METTL15P1P0C7V9 234 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 VDAC2P45880 294 aaPredicted RBP9.26□□□□□ -0.93
LDLR-212ENST00000560467 NKX2-5P52952 324 aaPredicted RBP9.26□□□□□ -0.93
LDLR-212ENST00000560467 EWSR1Q01844 656 aaKnown RBP eCLIP9.26□□□□□ -0.93
LDLR-212ENST00000560467 RAB31Q13636 194 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 OR8G2PQ6IF36 304 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 EIF5AL1Q6IS14 154 aaKnown RBP9.26□□□□□ -0.93
LDLR-212ENST00000560467 UNQ5815/PRO19632Q6UWF5 114 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 TMEM217Q8N7C4 229 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 OR10W1Q8NGF6 305 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 RNASEH2CQ8TDP1 164 aaKnown RBP9.26□□□□□ -0.93
LDLR-212ENST00000560467 CITED2Q99967 270 aaPredicted RBP9.26□□□□□ -0.93
LDLR-212ENST00000560467 GGACTQ9BVM4 153 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 ZNF355PQ9NSJ1 428 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 SERTAD4Q9NUC0 356 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
LDLR-212ENST00000560467 IGHV7-81A0A0B4J1V7 117 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 JTBO76095 146 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 MYOD1P15172 320 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 HIST1H1BP16401 226 aaKnown RBP9.25□□□□□ -0.93
LDLR-212ENST00000560467 PAX9P55771 341 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 EXOSC2Q13868 293 aaKnown RBP9.25□□□□□ -0.93
LDLR-212ENST00000560467 LGALSLQ3ZCW2 172 aaPredicted RBP9.25□□□□□ -0.93
LDLR-212ENST00000560467 AKIRIN2Q53H80 203 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 C10orf55Q5SWW7 151 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 TMEM14EPQ6UXP3 125 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 OR1P1Q8NH06 330 aa9.25□□□□□ -0.93
LDLR-212ENST00000560467 TRAV41A0A0B4J266 112 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 NPIPB5A8MRT5 1133 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 G3V3Q6 166 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 BCL2L11O43521 198 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 TMEM50AO95807 157 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 GPX4P36969 197 aaPredicted RBP9.24□□□□□ -0.93
LDLR-212ENST00000560467 SLC35B1P78383 322 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 SLC38A11Q08AI6 406 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 OPCMLQ14982 345 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 ECSCRQ19T08 205 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 NDUFA11Q86Y39 141 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 Q8N2B8 174 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 C9orf62Q8N4C0 152 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 TTC9CQ8N5M4 171 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 ZNF709Q8N972 641 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 LFNGQ8NES3 379 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 OR4F17Q8NGA8 305 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 OR5C1Q8NGR4 320 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 WIPF2Q8TF74 440 aaPredicted RBP9.24□□□□□ -0.93
LDLR-212ENST00000560467 CACNG8Q8WXS5 425 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 MISP3Q96FF7 219 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 OR4F4Q96R69 305 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 ZNF471Q9BX82 626 aaPredicted RBP9.24□□□□□ -0.93
LDLR-212ENST00000560467 SMIM3Q9BZL3 60 aa9.24□□□□□ -0.93
LDLR-212ENST00000560467 A0A1W2PRX2 142 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 IGLC7A0M8Q6 106 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 IGSF23A1L1A6 192 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 SMCO3A2RU48 225 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 K7EIL1 84 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 IGHG2P01859 326 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 REG1AP05451 166 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 APELAP0DMC3 54 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 TPT1P13693 172 aaKnown RBP9.23□□□□□ -0.93
LDLR-212ENST00000560467 AREGP15514 252 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 IGLL1P15814 213 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 CXCL2P19875 107 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 OPRK1P41145 380 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 NHLH2Q02577 135 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 CLINT1Q14677 625 aa9.23□□□□□ -0.93
LDLR-212ENST00000560467 TMEM95Q3KNT9 176 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms