RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RNF141Q8WVD5 230 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 CIB3Q96Q77 187 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 AGMATQ9BSE5 352 aa10.51□□□□□ -0.73
SMAD3-214ENST00000560402 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 FOXA2Q9Y261 457 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-214ENST00000560402 A0A1W2PN81 502 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 LINC01619G3V211 115 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 SYNGR2O43760 224 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 PITX3O75364 302 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 RBMXL2O75526 392 aaKnown RBP10.5□□□□□ -0.73
SMAD3-214ENST00000560402 DFFBO76075 338 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 LGALS1P09382 135 aaKnown RBP10.5□□□□□ -0.73
SMAD3-214ENST00000560402 MC5RP33032 325 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 DUTP33316 252 aaKnown RBP10.5□□□□□ -0.73
SMAD3-214ENST00000560402 CHRNA7P36544 502 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 TAS2R30P59541 319 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 NDPQ00604 133 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 EWSR1Q01844 656 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMAD3-214ENST00000560402 TMEM267Q0VDI3 215 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-214ENST00000560402 PLGLAQ15195 96 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 OR2B11Q5JQS5 317 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
SMAD3-214ENST00000560402 FCGR3BO75015 233 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 KRASP01116 189 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 IGKV1-5P01602 117 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 NMBP08949 121 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 RRASP10301 218 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 HBG1P69891 147 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 HBG2P69892 147 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 RTL8BQ17RB0 113 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 UBAC2Q8NBM4 344 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 DMBX1Q8NFW5 382 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 RBMXL1Q96E39 390 aaKnown RBP10.49□□□□□ -0.73
SMAD3-214ENST00000560402 OR5B12Q96R08 314 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 RNF5Q99942 180 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 MAGT1Q9H0U3 335 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 CYTL1Q9NRR1 136 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 WASHC3Q9Y3C0 194 aa10.49□□□□□ -0.73
SMAD3-214ENST00000560402 H0YJW9 148 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 SAP30O75446 220 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 S1PR2O95136 353 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 HRASP01112 189 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 IGKV1-39P01597 117 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 APOA2P02652 100 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 IGKV1D-39P04432 117 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 NQO2P16083 231 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 RPL30P62888 115 aaKnown RBP10.48□□□□□ -0.73
SMAD3-214ENST00000560402 CX3CL1P78423 397 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
SMAD3-214ENST00000560402 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 OR1S2Q8NGQ3 325 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 RITA1Q96K30 269 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 SMIM8Q96KF7 97 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 ASCL2Q99929 193 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 FBXL15Q9H469 300 aa10.48□□□□□ -0.73
SMAD3-214ENST00000560402 MARCH11A6NNE9 402 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 SOX15O60248 233 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 IFNA5P01569 189 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 CT45A6P0DMU7 189 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 CT45A5P0DMU8 189 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 CT45A7P0DMV0 189 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 G6PCP35575 357 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 RAB5CP51148 216 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 RPP30P78346 268 aaKnown RBP10.47□□□□□ -0.73
SMAD3-214ENST00000560402 BLOC1S1P78537 153 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 AKIRIN2Q53H80 203 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 RPL39P5Q59GN2 51 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 SLC25A24Q6NUK1 477 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 OR5AN1Q8NGI8 311 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 OR4A16Q8NH70 328 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 ABHD5Q8WTS1 349 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 TMED6Q8WW62 240 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 DLX4Q92988 240 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-214ENST00000560402 FLYWCH2Q96CP2 140 aaKnown RBP10.47□□□□□ -0.73
SMAD3-214ENST00000560402 SAT2Q96F10 170 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-214ENST00000560402 TSNAXQ99598 290 aaKnown RBP10.47□□□□□ -0.73
SMAD3-214ENST00000560402 PSENENQ9NZ42 101 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 FBXO7Q9Y3I1 522 aa10.47□□□□□ -0.73
SMAD3-214ENST00000560402 HUWE1Q7Z6Z7 4374 aaKnown RBP10.47□□□□□ -0.73
SMAD3-214ENST00000560402 A0A0G2JRQ6 117 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 ANKRD34BA5PLL1 514 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 FAM24AA6NFZ4 105 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 LINC00473A8K010 186 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 H3BUA1 57 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 H7C2Y5 167 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 SEC11BP0C7V7 166 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 GP9P14770 177 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 SULT1A1P50225 295 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 SLURP1P55000 103 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 UBE2KP61086 200 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 TNFRSF9Q07011 255 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 ACSM6Q6P461 480 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 PPP1R27Q86WC6 154 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 GNPNAT1Q96EK6 184 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-214ENST00000560402 C5orf30Q96GV9 206 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 RCHY1Q96PM5 261 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 C11orf1Q9H5F2 150 aa10.46□□□□□ -0.73
SMAD3-214ENST00000560402 TPSG1Q9NRR2 321 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms