RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 C12orf74Q32Q52 190 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 TRPT1Q86TN4 253 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 DMBX1Q8NFW5 382 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 DYNC2LI1Q8TCX1 351 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 GIMAP1Q8WWP7 306 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 LSM10Q969L4 123 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 SCRT1Q9BWW7 348 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 NXF2Q9GZY0 626 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 CELA1Q9UNI1 258 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 AGRNO00468 2067 aa14.24□□□□□ -0.13
RABGGTA-214ENST00000560163 DEFB131BA0A096LNP1 70 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 TRAV2A0A0B4J234 112 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 YIF1AO95070 293 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 APOHP02749 345 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 PTHLHP12272 177 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 SDC2P34741 201 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 TGFBR1P36897 503 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 CNPY1Q3B7I2 92 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 TMEM41BQ5BJD5 291 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 CSNK1G2-AS1Q8NCQ2 148 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 ST8SIA2Q92186 375 aa14.23□□□□□ -0.13
RABGGTA-214ENST00000560163 I3L2K1 104 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 TMEM127O75204 238 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 PPYP01298 95 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 RAB3BP20337 219 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 RPS19P39019 145 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 CATR1Q13166 79 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 STHQ8IWL8 128 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 CADM3Q8N126 398 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 SLC25A46Q96AG3 418 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 TXN2Q99757 166 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 COMMD9Q9P000 198 aa14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 CCDC59Q9P031 241 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-214ENST00000560163 LRP1BQ9NZR2 4599 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 C4BPBP20851 252 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 GNG2P59768 71 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 ZNF818PQ6ZRF7 136 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 CROCCP3Q8IVE0 287 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 OR1P1Q8NH06 330 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 NDUFAF3Q9BU61 184 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 SLC5A7Q9GZV3 580 aa14.21□□□□□ -0.13
RABGGTA-214ENST00000560163 MARCH11A6NNE9 402 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 DNASE2O00115 360 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 CD74P04233 296 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 SPP1P10451 314 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 MORN3Q6PF18 240 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 ZNF767PQ75MW2 155 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 CENPSQ8N2Z9 138 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 DUSP18Q8NEJ0 188 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 OR51H1Q8NH63 302 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 HINT2Q9BX68 163 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 PTTG2Q9NZH5 202 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 OR51B2Q9Y5P1 312 aa14.2□□□□□ -0.14
RABGGTA-214ENST00000560163 ST8SIA3O43173 380 aa14.19□□□□□ -0.14
RABGGTA-214ENST00000560163 ZNF182P17025 639 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-214ENST00000560163 MFAP4P55083 255 aa14.19□□□□□ -0.14
RABGGTA-214ENST00000560163 TOMM20LQ6UXN7 152 aa14.19□□□□□ -0.14
RABGGTA-214ENST00000560163 BEST4Q8NFU0 473 aa14.19□□□□□ -0.14
RABGGTA-214ENST00000560163 NSG2Q9Y328 171 aa14.19□□□□□ -0.14
RABGGTA-214ENST00000560163 NOTOA8MTQ0 251 aa14.18□□□□□ -0.14
RABGGTA-214ENST00000560163 RORCP51449 518 aa14.18□□□□□ -0.14
RABGGTA-214ENST00000560163 MXD1Q05195 221 aa14.18□□□□□ -0.14
RABGGTA-214ENST00000560163 TBC1D24Q9ULP9 559 aa14.18□□□□□ -0.14
RABGGTA-214ENST00000560163 DBX1A6NMT0 343 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 CDK2AP2O75956 126 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 CLEC2LP0C7M8 214 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 GNRHRP30968 328 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 ARPC4P59998 168 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 AADACL3Q5VUY0 350 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 SFXN4Q6P4A7 337 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 HOGA1Q86XE5 327 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 TMEM56Q96MV1 263 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 GINS3Q9BRX5 216 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 SLIRPQ9GZT3 109 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 ZFAND3Q9H8U3 227 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 CLEC5AQ9NY25 188 aa14.17□□□□□ -0.14
RABGGTA-214ENST00000560163 IGLV2-18A0A075B6J9 118 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 IGHV3-66A0A0C4DH42 116 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 K7EQG2 157 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 SCGNO76038 276 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 KRASP01116 189 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 IGHV3-48P01763 117 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 EIF4EP06730 217 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 F2RP25116 425 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 FXYD4P59646 89 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 ERVK-16P61578 105 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 Q6ZRM9 215 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 GRAMD2BQ96HH9 432 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 TMEM14BQ9NUH8 114 aa14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 APOBP04114 4563 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-214ENST00000560163 SMIM30A4D0T7 59 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 KNCNA6PVL3 124 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 MT-CO2P00403 227 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 SCAND1P57086 179 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 RPL11P62913 178 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 FCAMRQ8WWV6 532 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 AP3S1Q92572 193 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 MISP3Q96FF7 219 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 RABAC1Q9UI14 185 aa14.15□□□□□ -0.14
RABGGTA-214ENST00000560163 GNG7O60262 68 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms