RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 H7C2Y5 167 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 RBFOX2O43251 390 aaKnown RBP eCLIP7.21□□□□□ -1.26
IDH3A-217ENST00000559889 IFNA10P01566 189 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 KIR2DS2P43631 304 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 THBS3P49746 956 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 CEBPGP53567 150 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 PEA15Q15121 130 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 C16orf82Q7Z2V1 217 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 OR9G1Q8NH87 305 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 CLCC1Q96S66 551 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 PBDC1Q9BVG4 233 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 HINT2Q9BX68 163 aa7.21□□□□□ -1.26
IDH3A-217ENST00000559889 J3QR06 171 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 ITGB1BP1O14713 200 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 EIF3GO75821 320 aaKnown RBP eCLIP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 BRS3P32247 399 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 CEACAM3P40198 252 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 PRRX1P54821 245 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 DIAPH2-AS1Q14236 149 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 HAGHQ16775 308 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 NSUN5P1Q3KNT7 163 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 TCTEX1D4Q5JR98 221 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 OR4A47Q6IF82 309 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 SLC25A48Q6ZT89 311 aaKnown RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 NDUFA11Q86Y39 141 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 OR10X1Q8NGY0 326 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 DDB2Q92466 427 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 RBM14Q96PK6 669 aaKnown RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 RARRES2Q99969 163 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 WDR61Q9GZS3 305 aaKnown RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 HIPK2Q9H2X6 1198 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 VSIRQ9H7M9 311 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 FAM74A7A6NL05 159 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 FAM90A9PA6NNJ1 464 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 OOSP1A8MZH6 123 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 IGKV1-16P04430 117 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 CT45A6P0DMU7 189 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 CT45A5P0DMU8 189 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 CT45A7P0DMV0 189 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 VDAC2P45880 294 aaPredicted RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 HOXA1P49639 335 aaPredicted RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 BEAN1Q3B7T3 259 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 FAM74A3Q4VXF1 159 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 KPRPQ5T749 579 aaPredicted RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 SAMD5Q5TGI4 173 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 COMMD1Q8N668 190 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 PINX1Q96BK5 328 aaKnown RBP7.2□□□□□ -1.26
IDH3A-217ENST00000559889 SLC25A33Q9BSK2 321 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 RPRMQ9NS64 109 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 SLC35D1Q9NTN3 355 aa7.2□□□□□ -1.26
IDH3A-217ENST00000559889 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 A0A1W2PPI3 338 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 SMCO3A2RU48 225 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
IDH3A-217ENST00000559889 SNAPINO95295 136 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 OR13C7P0DN81 318 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 SPCS3P61009 180 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 RAB2AP61019 212 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 LCN15Q6UWW0 184 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 LFNGQ8NES3 379 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 ADTRPQ96IZ2 230 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 GAB2Q9UQC2 676 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 CARHSP1Q9Y2V2 147 aaKnown RBP7.19□□□□□ -1.26
IDH3A-217ENST00000559889 HRASP01112 189 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 OR8U8P0C7N1 319 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 MYOD1P15172 320 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 ATF4P18848 351 aaPredicted RBP7.19□□□□□ -1.26
IDH3A-217ENST00000559889 FGF7P21781 194 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 NPBWR1P48145 328 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 FGF8P55075 233 aaPredicted RBP7.19□□□□□ -1.26
IDH3A-217ENST00000559889 CCDC144NLQ6NUI1 221 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 SPSB3Q6PJ21 355 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 OR5AU1Q8NGC0 362 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 OR10A7Q8NGE5 316 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 TMEM147Q9BVK8 224 aa7.19□□□□□ -1.26
IDH3A-217ENST00000559889 RBFOX3A6NFN3 312 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
IDH3A-217ENST00000559889 IFNA4P05014 189 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 TMEM30BQ3MIR4 351 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 ARSJQ5FYB0 599 aaPredicted RBP7.18□□□□□ -1.26
IDH3A-217ENST00000559889 C10orf91Q5T1B1 145 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 C10orf99Q6UWK7 81 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 CBLN2Q8IUK8 224 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 RPEQ96AT9 228 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 C20orf24Q9BUV8 137 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 MRPL20Q9BYC9 149 aaKnown RBP7.18□□□□□ -1.26
IDH3A-217ENST00000559889 NOTCH3Q9UM47 2321 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 C15orf61A6NNL5 157 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 C15orf62A8K5M9 175 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 PMS2P5A8MQ11 134 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 DNASE2O00115 360 aaPredicted RBP7.18□□□□□ -1.26
IDH3A-217ENST00000559889 RRHO14718 337 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 AKR1C3P42330 323 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 RPP30P78346 268 aaKnown RBP7.18□□□□□ -1.26
IDH3A-217ENST00000559889 SERF2P84101 59 aa7.18□□□□□ -1.26
IDH3A-217ENST00000559889 ATP6V1FQ16864 119 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms