RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 IGKV1-39P01597 117 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 IGKV1D-39P04432 117 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
SPG11-219ENST00000559822 SUB1P53999 127 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPG11-219ENST00000559822 PIGPP57054 158 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 LYG2Q86SG7 212 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 SLC35G3Q8N808 338 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 CCDC71LQ8N9Z2 235 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 DUSP18Q8NEJ0 188 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 ZFAND1Q8TCF1 268 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 RNF2Q99496 336 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 LYSTQ99698 3801 aa9.1□□□□□ -0.95
SPG11-219ENST00000559822 RYR2Q92736 4967 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 A0A0J9YWU9 116 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 CORTO00230 105 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 CHEK1O14757 476 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 SCGB2A1O75556 95 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 B3GALNT1O75752 331 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 ZNF182P17025 639 aaPredicted RBP9.09□□□□□ -0.95
SPG11-219ENST00000559822 LHFPL1Q86WI0 220 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 RNF183Q96D59 192 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 TMEM231Q9H6L2 316 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 COPZ2Q9P299 210 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 EXTL2Q9UBQ6 330 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 KLK11Q9UBX7 282 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 MTFP1Q9UDX5 166 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
SPG11-219ENST00000559822 C3orf85A0A1B0GTC6 90 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 GABARAPO95166 117 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 IFNA17P01571 189 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 RPL35AP18077 110 aaKnown RBP9.08□□□□□ -0.96
SPG11-219ENST00000559822 TAS2R19P59542 299 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 PMS2P11Q13670 270 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 RNASE12Q5GAN4 147 aaKnown RBP9.08□□□□□ -0.96
SPG11-219ENST00000559822 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 OR52I2Q8NH67 350 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 RNASE11Q8TAA1 199 aaKnown RBP9.08□□□□□ -0.96
SPG11-219ENST00000559822 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
SPG11-219ENST00000559822 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 ENY2Q9NPA8 101 aa9.08□□□□□ -0.96
SPG11-219ENST00000559822 KLK5Q9Y337 293 aaPredicted RBP9.08□□□□□ -0.96
SPG11-219ENST00000559822 MPTX1A8MV57 137 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 ST8SIA3O43173 380 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 IGKV1-5P01602 117 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 IGHV3-48P01763 117 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 CD3DP04234 171 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 PI3P19957 117 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 TFPI2P48307 235 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 HOXA1P49639 335 aaPredicted RBP9.07□□□□□ -0.96
SPG11-219ENST00000559822 PPP5CP53041 499 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 MRPS10P82664 201 aaKnown RBP9.07□□□□□ -0.96
SPG11-219ENST00000559822 SSBP1Q04837 148 aaKnown RBP9.07□□□□□ -0.96
SPG11-219ENST00000559822 TCF24Q7RTU0 167 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 TMEM229BQ8NBD8 167 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 TERB2Q8NHR7 220 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 GATAD1Q8WUU5 269 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 TP53RKQ96S44 253 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
SPG11-219ENST00000559822 IGKV3-7A0A075B6H7 116 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 IGHV3-49A0A0A0MS15 119 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 A0A0B4J293 547 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 A0A1W2PS18 150 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 RAB3DO95716 219 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 P0C879 139 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 MEF2DQ14814 521 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 CTF1Q16619 201 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 SCGB2B2Q4G0G5 96 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 SPINK9Q5DT21 86 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 TOMM20LQ6UXN7 152 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 APRG1Q8IVJ8 170 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 FAM219AQ8IW50 185 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 LINC00476Q8WZB0 136 aa9.06□□□□□ -0.96
SPG11-219ENST00000559822 GABARAPH6UMI1 98 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 DNASE2O00115 360 aaPredicted RBP9.05□□□□□ -0.96
SPG11-219ENST00000559822 DFFBO76075 338 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 CD74P04233 296 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 UCP1P25874 307 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 OPRK1P41145 380 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 IZUMO4Q1ZYL8 232 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 GPR107Q5VW38 600 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 PVRIGQ6DKI7 326 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 STEAP1BQ6NZ63 245 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 CEMP1Q6PRD7 247 aaPredicted RBP9.05□□□□□ -0.96
SPG11-219ENST00000559822 GBGT1Q8N5D6 347 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 OR13C8Q8NGS7 320 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 NARS2Q96I59 477 aaKnown RBP9.05□□□□□ -0.96
SPG11-219ENST00000559822 ZNF414Q96IQ9 312 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 ABHD1Q96SE0 405 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 VSIRQ9H7M9 311 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 RABL2AQ9UBK7 228 aaPredicted RBP9.05□□□□□ -0.96
SPG11-219ENST00000559822 RABL2BQ9UNT1 228 aa9.05□□□□□ -0.96
SPG11-219ENST00000559822 C14orf166Q9Y224 244 aaKnown RBP9.05□□□□□ -0.96
SPG11-219ENST00000559822 PUS1Q9Y606 427 aaKnown RBP eCLIP9.05□□□□□ -0.96
SPG11-219ENST00000559822 IGHV3OR16-13A0A075B7E8 117 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 TRAV30A0A087WSZ9 112 aa9.04□□□□□ -0.96
SPG11-219ENST00000559822 IGHV3-74A0A0B4J1X5 117 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms