RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 APRG1Q8IVJ8 170 aa11.04□□□□□ -0.64
LRRC28-213ENST00000559399 MAP6D1Q9H9H5 199 aa11.04□□□□□ -0.64
LRRC28-213ENST00000559399 TRAV14DV4A0A0A6YYC5 116 aa11.03□□□□□ -0.64
LRRC28-213ENST00000559399 PGAM2P15259 253 aa11.03□□□□□ -0.64
LRRC28-213ENST00000559399 TFPI2P48307 235 aa11.03□□□□□ -0.64
LRRC28-213ENST00000559399 RORCP51449 518 aa11.03□□□□□ -0.64
LRRC28-213ENST00000559399 RND3P61587 244 aa11.03□□□□□ -0.64
LRRC28-213ENST00000559399 RNASE10Q5GAN6 216 aaKnown RBP11.03□□□□□ -0.64
LRRC28-213ENST00000559399 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
LRRC28-213ENST00000559399 ZNF486Q96H40 463 aaPredicted RBP11.03□□□□□ -0.64
LRRC28-213ENST00000559399 GINS3Q9BRX5 216 aa11.03□□□□□ -0.64
LRRC28-213ENST00000559399 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 FAM25AB3EWG3 89 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 FAM25CB3EWG5 89 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 FAM25GB3EWG6 89 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 LY6G6CO95867 125 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 PI3P19957 117 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 SNCAP37840 140 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 NPBWR1P48145 328 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 AKR1C2P52895 323 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 PIGPP57054 158 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 IZUMO4Q1ZYL8 232 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 SPINK9Q5DT21 86 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 RNASE12Q5GAN4 147 aaKnown RBP11.02□□□□□ -0.65
LRRC28-213ENST00000559399 ARRDC1Q8N5I2 433 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 SLC35G3Q8N808 338 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 AP3S1Q92572 193 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 ALMS1Q8TCU4 4167 aa11.02□□□□□ -0.65
LRRC28-213ENST00000559399 IGHV3OR16-13A0A075B7E8 117 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 IGHV3-74A0A0B4J1X5 117 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 ATG12O94817 140 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 IGKV1-5P01602 117 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 CD5P06127 495 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 TBPP20226 339 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 ZNF124Q15973 351 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 FAM90A2PQ658T7 463 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 MZT2AQ6P582 158 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 TOMM20LQ6UXN7 152 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 TCF24Q7RTU0 167 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 LHFPL1Q86WI0 220 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 GBGT1Q8N5D6 347 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 DUSP18Q8NEJ0 188 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 TP53RKQ96S44 253 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 PDCD10Q9BUL8 212 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 KLK11Q9UBX7 282 aa11.01□□□□□ -0.65
LRRC28-213ENST00000559399 KLK5Q9Y337 293 aaPredicted RBP11.01□□□□□ -0.65
LRRC28-213ENST00000559399 A0A0B4J293 547 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 MPTX1A8MV57 137 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 INS-IGF2F8WCM5 200 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 ST8SIA3O43173 380 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 IFNA17P01571 189 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 P0C879 139 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 PPP5CP53041 499 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 TRIM16LQ309B1 348 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 ZNF600Q6ZNG1 722 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 OR52I2Q8NH67 350 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 GATAD1Q8WUU5 269 aa11□□□□□ -0.65
LRRC28-213ENST00000559399 CORTO00230 105 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 CD3DP04234 171 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 HOXA1P49639 335 aaPredicted RBP10.99□□□□□ -0.65
LRRC28-213ENST00000559399 CCDC71LQ8N9Z2 235 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 ST8SIA2Q92186 375 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 VSIRQ9H7M9 311 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 COPZ2Q9P299 210 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 EXTL2Q9UBQ6 330 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 MTFP1Q9UDX5 166 aa10.99□□□□□ -0.65
LRRC28-213ENST00000559399 PUS1Q9Y606 427 aaKnown RBP eCLIP10.99□□□□□ -0.65
LRRC28-213ENST00000559399 GABARAPO95166 117 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-213ENST00000559399 ZNF182P17025 639 aaPredicted RBP10.98□□□□□ -0.65
LRRC28-213ENST00000559399 SUB1P53999 127 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRRC28-213ENST00000559399 PVRIGQ6DKI7 326 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 ZFAND1Q8TCF1 268 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 C15orf40Q8WUR7 153 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 RRNAD1Q96FB5 475 aaKnown RBP10.98□□□□□ -0.65
LRRC28-213ENST00000559399 MS4A6AQ9H2W1 248 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 TMEM231Q9H6L2 316 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 ENY2Q9NPA8 101 aa10.98□□□□□ -0.65
LRRC28-213ENST00000559399 TRAV2A0A0B4J234 112 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 DNASE2O00115 360 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-213ENST00000559399 B3GALNT1O75752 331 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 DFFBO76075 338 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
LRRC28-213ENST00000559399 RPL11P62913 178 aaKnown RBP10.97□□□□□ -0.65
LRRC28-213ENST00000559399 CTF1Q16619 201 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 SP6Q3SY56 376 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 OR4D10Q8NGI6 311 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 OR13C8Q8NGS7 320 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 RNASE11Q8TAA1 199 aaKnown RBP10.97□□□□□ -0.65
LRRC28-213ENST00000559399 PHLDA1Q8WV24 401 aaPredicted RBP10.97□□□□□ -0.65
LRRC28-213ENST00000559399 ABHD1Q96SE0 405 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 RARRES2Q99969 163 aa10.97□□□□□ -0.65
LRRC28-213ENST00000559399 NAA50Q9GZZ1 169 aaKnown RBP10.97□□□□□ -0.65
LRRC28-213ENST00000559399 A0A1B0GU03 582 aa10.96□□□□□ -0.65
LRRC28-213ENST00000559399 SCGB2A1O75556 95 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms