RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
TPM1-219ENST00000559397 MMDQ15546 238 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 C2orf83Q53S99 150 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 C10orf55Q5SWW7 151 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 PPP1R27Q86WC6 154 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 EIF4E3Q8N5X7 224 aaKnown RBP13.1□□□□□ -0.31
TPM1-219ENST00000559397 Q8N9W7 124 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 METTL1Q9UBP6 276 aaKnown RBP13.1□□□□□ -0.31
TPM1-219ENST00000559397 MOB4Q9Y3A3 225 aa13.1□□□□□ -0.31
TPM1-219ENST00000559397 PLXNB1O43157 2135 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 UBE2L5PA0A1B0GUS4 154 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 NCBP2LA6PVI3 153 aaKnown RBP13.09□□□□□ -0.31
TPM1-219ENST00000559397 AMY1AP04745 511 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 RNASE2P10153 161 aaKnown RBP13.09□□□□□ -0.31
TPM1-219ENST00000559397 DLK1P80370 383 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 PXDC1Q5TGL8 231 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 TMEM182Q6ZP80 229 aaPredicted RBP13.09□□□□□ -0.31
TPM1-219ENST00000559397 HSD17B13Q7Z5P4 300 aaPredicted RBP13.09□□□□□ -0.31
TPM1-219ENST00000559397 C5orf56Q8N8D9 126 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 LYPD6BQ8NI32 183 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 FBXL15Q9H469 300 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 C1RLQ9NZP8 487 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
TPM1-219ENST00000559397 IFNA4P05014 189 aa13.08□□□□□ -0.31
TPM1-219ENST00000559397 COMPP49747 757 aaPredicted RBP13.08□□□□□ -0.31
TPM1-219ENST00000559397 ERHP84090 104 aaKnown RBP13.08□□□□□ -0.31
TPM1-219ENST00000559397 BTNL8Q6UX41 500 aa13.08□□□□□ -0.31
TPM1-219ENST00000559397 RSG1Q9BU20 258 aa13.08□□□□□ -0.31
TPM1-219ENST00000559397 WDR83OSQ9Y284 106 aa13.08□□□□□ -0.31
TPM1-219ENST00000559397 NF1P21359 2839 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 FNDC10F2Z333 226 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
TPM1-219ENST00000559397 WT1-ASQ06250 92 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 C5orf64Q2M2E5 130 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 Q6ZRG5 221 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 LURAP1LQ8IV03 231 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 KIAA1456Q9P272 454 aa13.08□□□□□ -0.32
TPM1-219ENST00000559397 NUDT19A8MXV4 375 aa13.07□□□□□ -0.32
TPM1-219ENST00000559397 TEX46H3BTG2 121 aa13.07□□□□□ -0.32
TPM1-219ENST00000559397 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
TPM1-219ENST00000559397 SERF2P84101 59 aa13.07□□□□□ -0.32
TPM1-219ENST00000559397 MARC2Q969Z3 335 aa13.07□□□□□ -0.32
TPM1-219ENST00000559397 IGLC7A0M8Q6 106 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 M0QZK8 103 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 FCN1O00602 326 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 ACTL6BO94805 426 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 FGF7P21781 194 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 SNCAP37840 140 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 CAMLGP49069 296 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 FHITP49789 147 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 BLCAPP62952 87 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 DPPA3Q6W0C5 159 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 FBXO7Q9Y3I1 522 aa13.06□□□□□ -0.32
TPM1-219ENST00000559397 RAB19A4D1S5 217 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 PRH1P02810 166 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 SRSF2Q01130 221 aaKnown RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 TNXAQ16473 311 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 AKR1C8PQ5T2L2 129 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 MRPL41Q8IXM3 137 aaKnown RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 RASL11BQ9BPW5 248 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 SRSF8Q9BRL6 282 aaKnown RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 SH2D7A6NKC9 451 aaPredicted RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 MPDU1O75352 247 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 RPL15P61313 204 aaKnown RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 IL34Q6ZMJ4 242 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 ZNF114Q8NC26 417 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 FAM213BQ8TBF2 198 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 HRH4Q9H3N8 390 aa13.05□□□□□ -0.32
TPM1-219ENST00000559397 LSM4Q9Y4Z0 139 aaKnown RBP13.05□□□□□ -0.32
TPM1-219ENST00000559397 HLA-DRB1P01911 266 aa13.04□□□□□ -0.32
TPM1-219ENST00000559397 OR13C7P0DN81 318 aa13.04□□□□□ -0.32
TPM1-219ENST00000559397 PLGLAQ15195 96 aa13.04□□□□□ -0.32
TPM1-219ENST00000559397 Q6ZS46 218 aa13.04□□□□□ -0.32
TPM1-219ENST00000559397 P2RX4Q99571 388 aa13.04□□□□□ -0.32
TPM1-219ENST00000559397 NPVFQ9HCQ7 196 aa13.04□□□□□ -0.32
TPM1-219ENST00000559397 SUB1P53999 127 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM1-219ENST00000559397 PRIMA1Q86XR5 153 aa13.03□□□□□ -0.32
TPM1-219ENST00000559397 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
TPM1-219ENST00000559397 SRSF12Q8WXF0 261 aaKnown RBP13.03□□□□□ -0.32
TPM1-219ENST00000559397 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
TPM1-219ENST00000559397 RPRMQ9NS64 109 aa13.03□□□□□ -0.32
TPM1-219ENST00000559397 SETD2Q9BYW2 2564 aaPredicted RBP13.03□□□□□ -0.32
TPM1-219ENST00000559397 GPX4P36969 197 aaPredicted RBP13.02□□□□□ -0.32
TPM1-219ENST00000559397 GNB1P62873 340 aa13.02□□□□□ -0.32
TPM1-219ENST00000559397 CD69Q07108 199 aa13.02□□□□□ -0.32
TPM1-219ENST00000559397 ZNF616Q08AN1 781 aa13.02□□□□□ -0.32
TPM1-219ENST00000559397 UQCC3Q6UW78 93 aa13.02□□□□□ -0.32
TPM1-219ENST00000559397 CACNG8Q8WXS5 425 aa13.02□□□□□ -0.32
TPM1-219ENST00000559397 NPFFR1Q9GZQ6 430 aa13.02□□□□□ -0.32
TPM1-219ENST00000559397 JMJD1CQ15652 2540 aa13.02□□□□□ -0.33
TPM1-219ENST00000559397 IGHV7-81A0A0B4J1V7 117 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms