RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 OR4C12Q96R67 309 aa11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 CITED2Q99967 270 aaPredicted RBP11.47□□□□□ -0.57
SNRPA1-207ENST00000559309 CMYA5Q8N3K9 4069 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 TRAV14DV4A0A0A6YYC5 116 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 A0A1B0GVG6 124 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 MPC2O95563 127 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 TRGV3P03979 118 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 PF4V1P10720 104 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 IAPPP10997 89 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 NPY1RP25929 384 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 RNASEH2CQ8TDP1 164 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 VN1R17PQ8TDU5 208 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 ZNF414Q96IQ9 312 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 MS4A10Q96PG2 267 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 FNDC4Q9H6D8 234 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 ENY2Q9NPA8 101 aa11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-207ENST00000559309 A0A0G2JLM5 398 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 CORTO00230 105 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 WRBO00258 174 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 SSSCA1O60232 199 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 OR2J3O76001 311 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 SNCAP37840 140 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 TPPP2P59282 170 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 RAP2BP61225 183 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 GNB4Q9HAV0 340 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
SNRPA1-207ENST00000559309 MFSD2BA6NFX1 497 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 LGALS1P09382 135 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 DEFA4P12838 97 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 FHL3Q13643 280 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 EXOSC2Q13868 293 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 C15orf32Q32M92 178 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 Q5BKY6 102 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 PRSS54Q6PEW0 395 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 TMEM65Q6PI78 240 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 SHISA2Q6UWI4 295 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 C12orf54Q6X4T0 127 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 C18orf65Q6ZTR6 163 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 NOXA1Q86UR1 476 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 SCARB1Q8WTV0 552 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 C4orf3Q8WVX3 66 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 PSENENQ9NZ42 101 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 OR5AC2Q9NZP5 309 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 THYN1Q9P016 225 aa11.44□□□□□ -0.58
SNRPA1-207ENST00000559309 MEGF8Q7Z7M0 2845 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 CYB5BO43169 146 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 SCGB1D2O95969 90 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 IFNA10P01566 189 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 DEFA5Q01523 94 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 SLC25A24Q6NUK1 477 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 ETV3LQ6ZN32 361 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 ST6GAL2Q96JF0 529 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 CXorf58Q96LI9 332 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 LSM5Q9Y4Y9 91 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 VWFP04275 2813 aa11.43□□□□□ -0.58
SNRPA1-207ENST00000559309 TRBV7-1A0A0A6YYK4 115 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 E5RGE8 158 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 MT-CO2P00403 227 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 SLC25A4P12235 298 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 GPX4P36969 197 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 P2RY1P47900 373 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 BCAP31P51572 246 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 ATP5G2Q06055 141 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 CD69Q07108 199 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 TXN2Q99757 166 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 ZNF355PQ9NSJ1 428 aa11.42□□□□□ -0.58
SNRPA1-207ENST00000559309 FNDC10F2Z333 226 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 H3BP45 60 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 CCNKO75909 580 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 S100A10P60903 97 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 RPP30P78346 268 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 ARL16Q0P5N6 197 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 MLANAQ16655 118 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 SPANXN5Q5MJ07 72 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 TMEM252Q8N6L7 170 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 C3orf56Q8N813 242 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 OR4X1Q8NH49 305 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 CACNG8Q8WXS5 425 aa11.41□□□□□ -0.58
SNRPA1-207ENST00000559309 IGSF23A1L1A6 192 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 FAM24AA6NFZ4 105 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 RLN2P04090 185 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 PET100P0DJ07 73 aa11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 PVALBP20472 110 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-207ENST00000559309 RAB11AP62491 216 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms