RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 YIPF6Q96EC8 236 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 RBM38Q9H0Z9 239 aaKnown RBP11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 MS4A6AQ9H2W1 248 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
CDC42BPB-205ENST00000559245 IGHV4-28A0A0C4DH34 117 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 ST8SIA3O43173 380 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 GNG7O60262 68 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 MT-CO2P00403 227 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 IGHV3-48P01763 117 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 RBMY1A1P0DJD3 496 aaKnown RBP11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 RBMY1CP0DJD4 496 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 SDC2P34741 201 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 CBX5P45973 191 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 SCAND1P57086 179 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 MXD1Q05195 221 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 RBMY1FQ15415 496 aaKnown RBP11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 STHQ8IWL8 128 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 LILRB2Q8N423 598 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 FAM24BQ8N5W8 94 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 VSIRQ9H7M9 311 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 TMEM14BQ9NUH8 114 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 SSR3Q9UNL2 185 aa11.8□□□□□ -0.52
CDC42BPB-205ENST00000559245 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 TRAV10A0A0B4J240 114 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 CLEC2LP0C7M8 214 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 PSMB9P28065 219 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 IDNKQ5T6J7 187 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 DHRS11Q6UWP2 260 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 Q6ZTC4 211 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 MOB3AQ96BX8 217 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 TSC22D3Q99576 134 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 ZNF2Q9BSG1 426 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 DIABLOQ9NR28 239 aa11.79□□□□□ -0.52
CDC42BPB-205ENST00000559245 PKD1P98161 4303 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 TRAV2A0A0B4J234 112 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 GIG44P09565 113 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 MED14OSP0DP75 135 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 RFX2P48378 723 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 CMTM1Q8IZ96 169 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 DUSP18Q8NEJ0 188 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 PINX1Q96BK5 328 aaKnown RBP11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 BCL7BQ9BQE9 202 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 IFT46Q9NQC8 304 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
CDC42BPB-205ENST00000559245 A6NHS1 94 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 ZNF701M0R085 212 aaPredicted RBP11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 GABARAPO95166 117 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 MIFP14174 115 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 TMEM41BQ5BJD5 291 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 CENPSQ8N2Z9 138 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 RABAC1Q9UI14 185 aa11.77□□□□□ -0.53
CDC42BPB-205ENST00000559245 DNAH11Q96DT5 4516 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 SMIM31A0A1B0GVY4 71 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 GPR31O00270 319 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 PMP2P02689 132 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 PVRIGQ6DKI7 326 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 GPR141Q7Z602 305 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 TRPT1Q86TN4 253 aaKnown RBP11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 RNF126Q9BV68 326 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 NDUFA13Q9P0J0 144 aa11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 PUS1Q9Y606 427 aaKnown RBP eCLIP11.76□□□□□ -0.53
CDC42BPB-205ENST00000559245 PRSS29PA6NIE9 313 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 SPP1P10451 314 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 C4BPBP20851 252 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 NPBWR1P48145 328 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 ZNF600Q6ZNG1 722 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 SEC22AQ96IW7 307 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 FUNDC2Q9BWH2 189 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 TMEM231Q9H6L2 316 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 X6R8D5 127 aa11.75□□□□□ -0.53
CDC42BPB-205ENST00000559245 K7EQG2 157 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 TMBIM6P55061 237 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 ERHP84090 104 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 PHLDA2Q53GA4 152 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 H2BFWTQ7Z2G1 175 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 ANAPC10Q9UM13 185 aa11.74□□□□□ -0.53
CDC42BPB-205ENST00000559245 A0A1B0GU03 582 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 RTL8CO15255 209 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 AMBPP02760 352 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 TAS2R46P59540 309 aa11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-205ENST00000559245 CTF1Q16619 201 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms