RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SRRQ9GZT4 340 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 C21orf62Q9NYP8 219 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 TECRQ9NZ01 308 aaKnown RBP6.47□□□□□ -1.37
TPM1-213ENST00000558400 LSM4Q9Y4Z0 139 aaKnown RBP6.47□□□□□ -1.37
TPM1-213ENST00000558400 DMRT1Q9Y5R6 373 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 SMAD5-AS1Q9Y6J3 95 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 SORL1Q92673 2214 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 A0A0B4J2A0 478 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 DUXBA0A1W2PPF3 345 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 ZNF320A2RRD8 509 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 MFSD2BA6NFX1 497 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 PPP5D1E7EU14 171 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 TGOLN2O43493 480 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 NHLRC4P0CG21 123 aaPredicted RBP6.46□□□□□ -1.38
TPM1-213ENST00000558400 GP9P14770 177 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 SPNP16150 400 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 FCGR2BP31994 310 aaPredicted RBP6.46□□□□□ -1.38
TPM1-213ENST00000558400 CCR6P51684 374 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 MFAP4P55083 255 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 ATP5IP56385 69 aaPredicted RBP6.46□□□□□ -1.38
TPM1-213ENST00000558400 UBE2MP61081 183 aaKnown RBP6.46□□□□□ -1.38
TPM1-213ENST00000558400 TMEM187Q14656 261 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 LCN12Q6JVE5 192 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 C19orf35Q6ZS72 473 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 PRR25Q96S07 402 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 B9D2Q9BPU9 175 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 SHPKQ9UHJ6 478 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 UFC1Q9Y3C8 167 aa6.46□□□□□ -1.38
TPM1-213ENST00000558400 A0A1B0GU03 582 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 K7EIM0 57 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 NDUFA4O00483 81 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 NUPL2O15504 423 aaKnown RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 SCGB2A1O75556 95 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 IGHV3-23P01764 117 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 HLA-AP01891 365 aaKnown RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 SULT1A3P0DMM9 295 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 SULT1A4P0DMN0 295 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 FOLR2P14207 255 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 CBLN1P23435 193 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 GPR183P32249 361 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 HTR2BP41595 481 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 NPBWR1P48145 328 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 HOXA1P49639 335 aaPredicted RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 MFAP2P55001 183 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 RELQ04864 619 aaPredicted RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 CD69Q07108 199 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 BAK1Q16611 211 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 IZUMO4Q1ZYL8 232 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 Q56UQ5 140 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 Q6ZRM9 215 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 TMED4Q7Z7H5 227 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 CENPSQ8N2Z9 138 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 DUSP18Q8NEJ0 188 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 LHFPL5Q8TAF8 219 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 TMEM230Q96A57 120 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 GPR146Q96CH1 333 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 MISP3Q96FF7 219 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 HIPK2Q9H2X6 1198 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 HEYLQ9NQ87 328 aaPredicted RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 MRPL27Q9P0M9 148 aaKnown RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 S4R3C0 116 aa6.45□□□□□ -1.38
TPM1-213ENST00000558400 EPPK1P58107 5090 aaKnown RBP6.45□□□□□ -1.38
TPM1-213ENST00000558400 OR2T8A6NH00 312 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 C2orf70A6NJV1 201 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 A8MWP6 167 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 I3L2K1 104 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 K7EMT4 169 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 MT-CO2P00403 227 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 CTSGP08311 255 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 C8orf88P0DMB2 117 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 SLC25A6P12236 298 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 SUPT4H1P63272 117 aaKnown RBP6.44□□□□□ -1.38
TPM1-213ENST00000558400 SMCO1Q147U7 214 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 DEFB114Q30KQ6 69 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 PVRIGQ6DKI7 326 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 GTSCR1Q86UQ5 136 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 LRTM2Q8N967 370 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 UBAC2Q8NBM4 344 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 DYNLRB2Q8TF09 96 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 S100ZQ8WXG8 99 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 ZNF436Q9C0F3 470 aaPredicted RBP6.44□□□□□ -1.38
TPM1-213ENST00000558400 CACNG5Q9UF02 275 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 TMED3Q9Y3Q3 217 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 U3KQ87 197 aa6.44□□□□□ -1.38
TPM1-213ENST00000558400 TRAV30A0A087WSZ9 112 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 TRAV25A0A0B4J276 109 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 A0A0G2JRQ6 117 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 RPS10-NUDT3A0A1W2PQS6 291 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 C15orf62A8K5M9 175 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 A8MZ25 164 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 GNG7O60262 68 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 NDUFB6O95139 128 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 SFT2D2O95562 160 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 IL7P13232 177 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 VAMP1P23763 118 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 ANKRD55Q3KP44 614 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 C2orf83Q53S99 150 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 NMSQ5H8A3 153 aa6.43□□□□□ -1.38
TPM1-213ENST00000558400 ETFRF1Q6IPR1 90 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms