RNA–Protein interactions for RNA: ENST00000558300.1

TMOD3-202, Transcript of tropomodulin 3, humanhuman

TSL 2

Gene TMOD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-202ENST00000558300 MIXL1Q9H2W2 232 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 TUBA4BQ9H853 241 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 ACER3Q9NUN7 267 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 HHLA3Q9XRX5 114 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 SLC35A3Q9Y2D2 325 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 TIMM22Q9Y584 194 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 ZNF407Q9C0G0 2248 aa1.85□□□□□ -2.11
TMOD3-202ENST00000558300 ZSWIM8A7E2V4 1837 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 CACNA1SQ13698 1873 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 RALGAPA2Q2PPJ7 1873 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 IGKV1D-17A0A075B6S4 117 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 H3BQV1 296 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 H7C1C5 153 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 MFSD11O43934 449 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 NDUFC2O95298 119 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 TFPTP0C1Z6 253 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 SMIM17P0DL12 118 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 IDO1P14902 403 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 CASP1P29466 404 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 RPL28P46779 137 aaKnown RBP1.84□□□□□ -2.11
TMOD3-202ENST00000558300 PIGPP57054 158 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 YPEL3P61236 119 aaPredicted RBP1.84□□□□□ -2.11
TMOD3-202ENST00000558300 LCN6P62502 163 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 RHOBP62745 196 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 ZNF90Q03938 601 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 LCA10Q71F78 164 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 SLC35E3Q7Z769 313 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 RPP25LQ8N5L8 163 aaKnown RBP1.84□□□□□ -2.11
TMOD3-202ENST00000558300 SCGB3A1Q96QR1 104 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 SERPINI1Q99574 410 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 IMUPQ9GZP8 106 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 PBOV1Q9GZY1 135 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 MRPL40Q9NQ50 206 aaKnown RBP1.84□□□□□ -2.11
TMOD3-202ENST00000558300 SS18L2Q9UHA2 77 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 CCL26Q9Y258 94 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 TIMM9Q9Y5J7 89 aa1.84□□□□□ -2.11
TMOD3-202ENST00000558300 DOCK3Q8IZD9 2030 aa1.84□□□□□ -2.12
TMOD3-202ENST00000558300 KIF1BO60333 1816 aa1.84□□□□□ -2.12
TMOD3-202ENST00000558300 KDM5BQ9UGL1 1544 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 IGHV3-64A0A075B6Q5 118 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 TRAV41A0A0B4J266 112 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 GNG14A0A1W2PPG7 69 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 E7EQL1 145 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 GPR31O00270 319 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 SLC22A1O15245 554 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 ZNF73O43830 326 aaPredicted RBP1.83□□□□□ -2.12
TMOD3-202ENST00000558300 FUSP35637 526 aaKnown RBP eCLIP1.83□□□□□ -2.12
TMOD3-202ENST00000558300 TAF9Q16594 264 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 SCGB2B2Q4G0G5 96 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 TMEM78Q5T7P6 136 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 LYRM7Q5U5X0 104 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 HCP5Q6MZN7 132 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 AGTRAPQ6RW13 159 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 MIR17HGQ75NE6 70 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 STX19Q8N4C7 294 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 ZNF439Q8NDP4 499 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 PFN4Q8NHR9 129 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 GPER1Q99527 375 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 TMEM133Q9H2Q1 129 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 SLC39A9Q9NUM3 307 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 SSR3Q9UNL2 185 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 ERGIC3Q9Y282 383 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 DOCK5Q9H7D0 1870 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 NYNRINQ9P2P1 1898 aaKnown RBP1.83□□□□□ -2.12
TMOD3-202ENST00000558300 UHRF1BP1Q6BDS2 1440 aa1.83□□□□□ -2.12
TMOD3-202ENST00000558300 TRAPPC2LH3BP13 241 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 H3BT86 120 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 H7C2G1 150 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 IFNA21P01568 189 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 CRHP06850 196 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 S100A4P26447 101 aaKnown RBP1.82□□□□□ -2.12
TMOD3-202ENST00000558300 FXYD2P54710 66 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 GNG5P63218 68 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 SS18Q15532 418 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 LINC01554Q52M75 96 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 TRAPPC6BQ86SZ2 158 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 OR51T1Q8NGJ9 327 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 C11orf40Q8WZ69 217 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 MALSU1Q96EH3 234 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 MRPS24Q96EL2 167 aaKnown RBP1.82□□□□□ -2.12
TMOD3-202ENST00000558300 LYSMD1Q96S90 227 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 MED29Q9NX70 200 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 PRO2289Q9P1D8 64 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 NAT8Q9UHE5 227 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 AMMECR1Q9Y4X0 333 aaPredicted RBP1.82□□□□□ -2.12
TMOD3-202ENST00000558300 WDR90Q96KV7 1748 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 SLX4Q8IY92 1834 aa1.82□□□□□ -2.12
TMOD3-202ENST00000558300 SCAF11Q99590 1463 aaKnown RBP1.82□□□□□ -2.12
TMOD3-202ENST00000558300 TRPM6Q9BX84 2022 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 TRBV10-2A0A0K0K1G8 114 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 MEIS3P1A6NDR6 274 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 TMEM212A6NML5 194 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 LGALS3P17931 250 aaKnown RBP1.81□□□□□ -2.12
TMOD3-202ENST00000558300 CCR2P41597 374 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 RRN3P1Q2M238 152 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 PHF13Q86YI8 300 aaPredicted RBP1.81□□□□□ -2.12
TMOD3-202ENST00000558300 HIST3H2BBQ8N257 126 aa1.81□□□□□ -2.12
TMOD3-202ENST00000558300 TEX47Q8TBZ9 253 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms