RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 S100A10P60903 97 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 LRRC37A5PQ49AS3 106 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
NEDD1-213ENST00000557644 DUX3Q96PT4 197 aa11.84□□□□□ -0.51
NEDD1-213ENST00000557644 WNK1Q9H4A3 2382 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 FAM223BA6NKX1 122 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 NPY1RP25929 384 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 Q6ZNX1 250 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 FAM223AQ8IWN6 122 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 NMES1Q9C002 83 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 HIST1H1BP16401 226 aaKnown RBP11.83□□□□□ -0.52
NEDD1-213ENST00000557644 PAX9P55771 341 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 ATP5G2Q06055 141 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 U3KQ87 197 aa11.83□□□□□ -0.52
NEDD1-213ENST00000557644 A0A0G2JLM5 398 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 C15orf62A8K5M9 175 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 K7EIM0 57 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 SUB1P53999 127 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEDD1-213ENST00000557644 MLANAQ16655 118 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 C2orf83Q53S99 150 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 SPANXN5Q5MJ07 72 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 PVRIGQ6DKI7 326 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 C4orf3Q8WVX3 66 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 OR4C12Q96R67 309 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 THYN1Q9P016 225 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 PAIP2BQ9ULR5 123 aaKnown RBP11.82□□□□□ -0.52
NEDD1-213ENST00000557644 I3L521 148 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 TRBV12-3P01733 135 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
NEDD1-213ENST00000557644 PPP1R1CQ8WVI7 109 aa11.82□□□□□ -0.52
NEDD1-213ENST00000557644 CIB3Q96Q77 187 aaPredicted RBP11.82□□□□□ -0.52
NEDD1-213ENST00000557644 ANKRD34BA5PLL1 514 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 I3L2K1 104 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 CYB5BO43169 146 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 MT-CO2P00403 227 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 SCARB1Q8WTV0 552 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 FNDC4Q9H6D8 234 aaPredicted RBP11.81□□□□□ -0.52
NEDD1-213ENST00000557644 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 LGALS1P09382 135 aaKnown RBP11.81□□□□□ -0.52
NEDD1-213ENST00000557644 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
NEDD1-213ENST00000557644 ZNF343Q6P1L6 599 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 SMIM8Q96KF7 97 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 CCDC140Q96MF4 163 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 RAB40CQ96S21 281 aa11.81□□□□□ -0.52
NEDD1-213ENST00000557644 CHAC2Q8WUX2 184 aa11.8□□□□□ -0.52
NEDD1-213ENST00000557644 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
NEDD1-213ENST00000557644 ZNF436Q9C0F3 470 aaPredicted RBP11.8□□□□□ -0.52
NEDD1-213ENST00000557644 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
NEDD1-213ENST00000557644 hCG_2014768A0A024R1R8 64 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 H0YIZ8 118 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 IFNA4P05014 189 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 OPRK1P41145 380 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 ZC4H2Q9NQZ6 224 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 OR5AC2Q9NZP5 309 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
NEDD1-213ENST00000557644 DEDDO75618 318 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 TSPAN15O95858 294 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 CLEC19AQ6UXS0 136 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 OR11H1Q8NG94 326 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 ZNF502Q8TBZ5 544 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 EEF1AKMT3Q96AZ1 226 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 CXorf58Q96LI9 332 aa11.79□□□□□ -0.52
NEDD1-213ENST00000557644 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
NEDD1-213ENST00000557644 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 A0A087WW49 117 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 A0A1B0GVG6 124 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
NEDD1-213ENST00000557644 L7N2F9 121 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 CCNKO75909 580 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 VAMP2P63027 116 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 RUNX1Q01196 453 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 ETV3LQ6ZN32 361 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 PKD1L1Q8TDX9 2849 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.78□□□□□ -0.52
NEDD1-213ENST00000557644 PPP5D1E7EU14 171 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 CORTO00230 105 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 MPC2O95563 127 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 CLEC3BP05452 202 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 OR8U8P0C7N1 319 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 TAS2R30P59541 319 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 RNASEH2CQ8TDP1 164 aaKnown RBP11.78□□□□□ -0.52
NEDD1-213ENST00000557644 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
NEDD1-213ENST00000557644 CCL24O00175 119 aa11.77□□□□□ -0.52
NEDD1-213ENST00000557644 METTL15P1P0C7V9 234 aa11.77□□□□□ -0.52
NEDD1-213ENST00000557644 GPR183P32249 361 aa11.77□□□□□ -0.52
NEDD1-213ENST00000557644 CAV2P51636 162 aa11.77□□□□□ -0.52
NEDD1-213ENST00000557644 RPP30P78346 268 aaKnown RBP11.77□□□□□ -0.52
NEDD1-213ENST00000557644 Q5BKY6 102 aa11.77□□□□□ -0.52
NEDD1-213ENST00000557644 RNF126Q9BV68 326 aa11.77□□□□□ -0.52
NEDD1-213ENST00000557644 PEF1Q9UBV8 284 aaKnown RBP11.77□□□□□ -0.52
NEDD1-213ENST00000557644 TRBV7-1A0A0A6YYK4 115 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 OR2T8A6NH00 312 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms