RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TCTE3Q8IZS6 198 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 SPAG16Q8N0X2 631 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 CBR4Q8N4T8 237 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF383Q8NA42 475 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 OR52I1Q8NGK6 324 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 DYNLRB2Q8TF09 96 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 USMG5Q96IX5 58 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 CXorf58Q96LI9 332 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 SGK494Q96LW2 274 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 TSNAXQ99598 290 aaKnown RBP4.37□□□□□ -1.71
VPS33B-207ENST00000557470 SULT4A1Q9BR01 284 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 AGMATQ9BSE5 352 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 FUNDC2Q9BWH2 189 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 GGTLC1Q9BX51 225 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 RIMS4Q9H426 269 aaPredicted RBP4.37□□□□□ -1.71
VPS33B-207ENST00000557470 MED9Q9NWA0 146 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 ABRACLQ9P1F3 81 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 CKLFQ9UBR5 152 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 RPH3ALQ9UNE2 315 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 TMED3Q9Y3Q3 217 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 SELENOKQ9Y6D0 94 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 DNAH10Q8IVF4 4471 aa4.37□□□□□ -1.71
VPS33B-207ENST00000557470 TRBV5-5A0A0J9YX44 114 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 PNMA8CA0A1B0GUJ8 204 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 SMCO3A2RU48 225 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 GAGE12HA6NDE8 117 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 MSGN1A6NI15 193 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 C2orf70A6NJV1 201 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 MPTX1A8MV57 137 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 SULT1C2O00338 296 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 TCAPO15273 167 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 GPX5O75715 221 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 UPK1BO75841 260 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 IGLV2-23P01705 113 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 FOLR2P14207 255 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 KIR2DS2P43631 304 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 LGALS7P47929 136 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 RPS11P62280 158 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS33B-207ENST00000557470 TNFRSF9Q07011 255 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 PNRC1Q12796 327 aaPredicted RBP4.36□□□□□ -1.71
VPS33B-207ENST00000557470 ASAH1Q13510 395 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 CLLU1Q5K131 121 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 DNLZQ5SXM8 178 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 OR2G6Q5TZ20 316 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 SLC16A13Q7RTY0 426 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 LYG2Q86SG7 212 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 PDPNQ86YL7 162 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 EIF4E3Q8N5X7 224 aaKnown RBP4.36□□□□□ -1.71
VPS33B-207ENST00000557470 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
VPS33B-207ENST00000557470 OR52I2Q8NH67 350 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 MAFIPQ8WZ33 124 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 SMIM19Q96E16 107 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 PFDN5Q99471 154 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 C2orf88Q9BSF0 95 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 FAAP24Q9BTP7 215 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 NDUFAF3Q9BU61 184 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 SDHAF2Q9NX18 166 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 BABAM2Q9NXR7 383 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 OR1A1Q9P1Q5 309 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 COPZ2Q9P299 210 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF230Q9UIE0 474 aaPredicted RBP4.36□□□□□ -1.71
VPS33B-207ENST00000557470 KLK5Q9Y337 293 aaPredicted RBP4.36□□□□□ -1.71
VPS33B-207ENST00000557470 ORC6Q9Y5N6 252 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 ABCA13Q86UQ4 5058 aa4.36□□□□□ -1.71
VPS33B-207ENST00000557470 LOC102724200A0A096LPH7 203 aaPredicted RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 NDUFB8O95169 186 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 NAPSAO96009 420 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 LALBAP00709 142 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 HLA-AP01891 365 aaKnown RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 APOA2P02652 100 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 PRH1P02810 166 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 CEACAM6P40199 344 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 FHITP49789 147 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 RHOGP84095 191 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF45Q02386 682 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 BTN1A1Q13410 526 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 SPHARQ15513 63 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 MRGPRG-AS1Q2M3A8 158 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 Q499Y3 187 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 ZNF880Q6PDB4 577 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 C6orf201Q7Z4U5 140 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 COMMD7Q86VX2 200 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 C8orf59Q8N0T1 100 aaPredicted RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 TMEM61Q8N0U2 210 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 OR6M1Q8NGM8 313 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 RHOXF1Q8NHV9 184 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 SCARB1Q8WTV0 552 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 DEDD2Q8WXF8 326 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 CACNG8Q8WXS5 425 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 RBPMSQ93062 196 aaKnown RBP4.35□□□□□ -1.71
VPS33B-207ENST00000557470 PGLYRP3Q96LB9 341 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 NEDD4LQ96PU5 975 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 PHB2Q99623 299 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 C20orf24Q9BUV8 137 aa4.35□□□□□ -1.71
VPS33B-207ENST00000557470 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms