RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 DNAH2Q9P225 4427 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 TRAV14DV4A0A0A6YYC5 116 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 C15orf61A6NNL5 157 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 MT-CO2P00403 227 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 IZUMO4Q1ZYL8 232 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 HSD17B13Q7Z5P4 300 aaPredicted RBP10.26□□□□□ -0.77
SLIRP-210ENST00000557431 MOB3AQ96BX8 217 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 OR10C1Q96KK4 312 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 MFFQ9GZY8 342 aa10.26□□□□□ -0.77
SLIRP-210ENST00000557431 ST8SIA3O43173 380 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 DFFBO76075 338 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 RBMY1A1P0DJD3 496 aaKnown RBP10.25□□□□□ -0.77
SLIRP-210ENST00000557431 RBMY1CP0DJD4 496 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 MFAP4P55083 255 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-210ENST00000557431 TMEM187Q14656 261 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 RBMY1FQ15415 496 aaKnown RBP10.25□□□□□ -0.77
SLIRP-210ENST00000557431 TOMM20LQ6UXN7 152 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 Q8NAQ8 132 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 OR1P1Q8NH06 330 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 TMEM56Q96MV1 263 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 CMTM3Q96MX0 182 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 NXF2Q9GZY0 626 aaKnown RBP10.25□□□□□ -0.77
SLIRP-210ENST00000557431 MS4A6AQ9H2W1 248 aa10.25□□□□□ -0.77
SLIRP-210ENST00000557431 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 GNG7O60262 68 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 EIF4EP06730 217 aaKnown RBP10.24□□□□□ -0.77
SLIRP-210ENST00000557431 FGF2P09038 288 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 CBX5P45973 191 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 RORCP51449 518 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 RPL11P62913 178 aaKnown RBP10.24□□□□□ -0.77
SLIRP-210ENST00000557431 ZNF767PQ75MW2 155 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 GPR141Q7Z602 305 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 OR5H2Q8NGV7 314 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 TMEM14BQ9NUH8 114 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 COMMD3Q9UBI1 195 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 PRNDQ9UKY0 176 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 DNAH17Q9UFH2 4485 aa10.24□□□□□ -0.77
SLIRP-210ENST00000557431 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-210ENST00000557431 GPR31O00270 319 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 APOA1P02647 267 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 GIG44P09565 113 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-210ENST00000557431 C4BPBP20851 252 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 HLA-DMBP28068 263 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 TAS2R20P59543 309 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 TMEM69Q5SWH9 247 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 DHRS11Q6UWP2 260 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 Q6ZTC4 211 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 ATP6V0BQ99437 205 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 SCRT1Q9BWW7 348 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 ZFAND3Q9H8U3 227 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 CLEC5AQ9NY25 188 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 RABAC1Q9UI14 185 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 PCLOQ9Y6V0 5065 aa10.23□□□□□ -0.77
SLIRP-210ENST00000557431 DYNC1H1Q14204 4646 aaKnown RBP10.23□□□□□ -0.77
SLIRP-210ENST00000557431 PKHD1P08F94 4074 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 A0A1B0GU03 582 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 HLA-DMAP28067 261 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 HRH1P35367 487 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 TBC1D26Q86UD7 250 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 STHQ8IWL8 128 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 SEC22AQ96IW7 307 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 VSIRQ9H7M9 311 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 MRPL36Q9P0J6 103 aaKnown RBP10.22□□□□□ -0.77
SLIRP-210ENST00000557431 ANAPC10Q9UM13 185 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 CELA1Q9UNI1 258 aa10.22□□□□□ -0.77
SLIRP-210ENST00000557431 PUS1Q9Y606 427 aaKnown RBP eCLIP10.22□□□□□ -0.77
SLIRP-210ENST00000557431 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-210ENST00000557431 SMIM31A0A1B0GVY4 71 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 HPGDSO60760 199 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 ZNF182P17025 639 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-210ENST00000557431 ELK1P19419 428 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 PRSS3P35030 304 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 PPP5CP53041 499 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.77
SLIRP-210ENST00000557431 PAFAH1B2P68402 229 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 PRCDQ00LT1 54 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 MZT2AQ6P582 158 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 H2BFWTQ7Z2G1 175 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 CMTM1Q8IZ96 169 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 STXBP6Q8NFX7 210 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 OR4A16Q8NH70 328 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 AP3S1Q92572 193 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 GINS3Q9BRX5 216 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 FKBP11Q9NYL4 201 aa10.21□□□□□ -0.77
SLIRP-210ENST00000557431 IGHV4-4A0A075B6R2 117 aa10.2□□□□□ -0.78
SLIRP-210ENST00000557431 A0A1B0GVY2 172 aa10.2□□□□□ -0.78
SLIRP-210ENST00000557431 ZNF688P0C7X2 276 aa10.2□□□□□ -0.78
SLIRP-210ENST00000557431 NAT1P18440 290 aa10.2□□□□□ -0.78
SLIRP-210ENST00000557431 RPL5P46777 297 aaKnown RBP10.2□□□□□ -0.78
SLIRP-210ENST00000557431 MLANAQ16655 118 aa10.2□□□□□ -0.78
SLIRP-210ENST00000557431 TRPT1Q86TN4 253 aaKnown RBP10.2□□□□□ -0.78
SLIRP-210ENST00000557431 CLVS1Q8IUQ0 354 aaPredicted RBP10.2□□□□□ -0.78
SLIRP-210ENST00000557431 LYSMD2Q8IV50 215 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms