RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 YTHDF1Q9BYJ9 559 aaKnown RBP12.48□□□□□ -0.41
NEDD1-210ENST00000557400 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
NEDD1-210ENST00000557400 VSIRQ9H7M9 311 aa12.48□□□□□ -0.41
NEDD1-210ENST00000557400 TRAV2A0A0B4J234 112 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 DNASE2O00115 360 aaPredicted RBP12.47□□□□□ -0.41
NEDD1-210ENST00000557400 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 S100GP29377 79 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 TAS2R20P59543 309 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 DEFB131AP59861 70 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 PRCDQ00LT1 54 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 PHLDA2Q53GA4 152 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 TMEM69Q5SWH9 247 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 LEMD1Q68G75 181 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 TOMM20LQ6UXN7 152 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 H2BFWTQ7Z2G1 175 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 ST8SIA2Q92186 375 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
NEDD1-210ENST00000557400 SEC22AQ96IW7 307 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 HECTD4Q9Y4D8 3996 aa12.47□□□□□ -0.41
NEDD1-210ENST00000557400 IGLL5B9A064 214 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 HRH1P35367 487 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 UBE2NLQ5JXB2 153 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 Q8NAQ8 132 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 HRH4Q9H3N8 390 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 Q9H521 79 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 APLNQ9ULZ1 77 aa12.46□□□□□ -0.41
NEDD1-210ENST00000557400 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
NEDD1-210ENST00000557400 NPBWR1P48145 328 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 HSPE1P61604 102 aaKnown RBP12.45□□□□□ -0.42
NEDD1-210ENST00000557400 RPL11P62913 178 aaKnown RBP12.45□□□□□ -0.42
NEDD1-210ENST00000557400 ERHP84090 104 aaKnown RBP12.45□□□□□ -0.42
NEDD1-210ENST00000557400 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 TBC1D26Q86UD7 250 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 CROCCP3Q8IVE0 287 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 STHQ8IWL8 128 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 FAM24BQ8N5W8 94 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 DUSP18Q8NEJ0 188 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
NEDD1-210ENST00000557400 VPS13DQ5THJ4 4388 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 IGHV3-66A0A0C4DH42 116 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 IGKV1-39P01597 117 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 IGKV1D-39P04432 117 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 HLA-DMAP28067 261 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 PRSS3P35030 304 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 LYSMD2Q8IV50 215 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 SAMD12Q8N8I0 201 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 MRGPRFQ96AM1 343 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 ZFAND3Q9H8U3 227 aa12.44□□□□□ -0.42
NEDD1-210ENST00000557400 PUS1Q9Y606 427 aaKnown RBP eCLIP12.44□□□□□ -0.42
NEDD1-210ENST00000557400 TSPAN5P62079 268 aa12.43□□□□□ -0.42
NEDD1-210ENST00000557400 NEDD8Q15843 81 aa12.43□□□□□ -0.42
NEDD1-210ENST00000557400 TMEM41BQ5BJD5 291 aa12.43□□□□□ -0.42
NEDD1-210ENST00000557400 RABAC1Q9UI14 185 aa12.43□□□□□ -0.42
NEDD1-210ENST00000557400 PCLOQ9Y6V0 5065 aa12.43□□□□□ -0.42
NEDD1-210ENST00000557400 IGHV4-28A0A0C4DH34 117 aa12.42□□□□□ -0.42
NEDD1-210ENST00000557400 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
NEDD1-210ENST00000557400 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
NEDD1-210ENST00000557400 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
NEDD1-210ENST00000557400 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
NEDD1-210ENST00000557400 TRPT1Q86TN4 253 aaKnown RBP12.42□□□□□ -0.42
NEDD1-210ENST00000557400 KIAA1109Q2LD37 5005 aa12.42□□□□□ -0.42
NEDD1-210ENST00000557400 A0A1B0GU03 582 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 MIFP14174 115 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 NPPCP23582 126 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 TGFBR1P36897 503 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 SNCAP37840 140 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 UCP3P55916 312 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 SPINK9Q5DT21 86 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 GPX8Q8TED1 209 aa12.41□□□□□ -0.42
NEDD1-210ENST00000557400 TRAV10A0A0B4J240 114 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 A0A1W2PS18 150 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 INS-IGF2F8WCM5 200 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 K7EQG2 157 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 TMEM50AO95807 157 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 SPP1P10451 314 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 IZUMO4Q1ZYL8 232 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 MORN3Q6PF18 240 aaPredicted RBP12.4□□□□□ -0.42
NEDD1-210ENST00000557400 Q6ZTC4 211 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 CENPSQ8N2Z9 138 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 SLC35G3Q8N808 338 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 STXBP6Q8NFX7 210 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 GRAMD2BQ96HH9 432 aa12.4□□□□□ -0.42
NEDD1-210ENST00000557400 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
NEDD1-210ENST00000557400 CORTO00230 105 aa12.39□□□□□ -0.43
NEDD1-210ENST00000557400 C4BPBP20851 252 aa12.39□□□□□ -0.43
NEDD1-210ENST00000557400 RPS19P39019 145 aaKnown RBP12.39□□□□□ -0.43
NEDD1-210ENST00000557400 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
NEDD1-210ENST00000557400 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
NEDD1-210ENST00000557400 METTL26Q96S19 204 aa12.39□□□□□ -0.43
NEDD1-210ENST00000557400 SCPEP1Q9HB40 452 aa12.39□□□□□ -0.43
NEDD1-210ENST00000557400 IGHV4-4A0A075B6R2 117 aa12.38□□□□□ -0.43
NEDD1-210ENST00000557400 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
NEDD1-210ENST00000557400 CRYBB3P26998 211 aa12.38□□□□□ -0.43
NEDD1-210ENST00000557400 RCVRNP35243 200 aa12.38□□□□□ -0.43
NEDD1-210ENST00000557400 X6R8D5 127 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms