RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 HOXA1P49639 335 aaPredicted RBP10.55□□□□□ -0.72
VPS33B-206ENST00000557358 SRPXP78539 464 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 BSCL2Q96G97 398 aaPredicted RBP10.55□□□□□ -0.72
VPS33B-206ENST00000557358 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
VPS33B-206ENST00000557358 S4R3C0 116 aa10.55□□□□□ -0.72
VPS33B-206ENST00000557358 PRKDCP78527 4128 aaKnown RBP10.55□□□□□ -0.72
VPS33B-206ENST00000557358 MFSD2BA6NFX1 497 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 CORTO00230 105 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 CDS2O95674 445 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 CSN3P07498 182 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 OR4E1P0C645 316 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 PPP1R1AQ13522 171 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 C4orf46Q504U0 113 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 Q56UQ5 140 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 UBAC2Q8NBM4 344 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.54□□□□□ -0.72
VPS33B-206ENST00000557358 UFC1Q9Y3C8 167 aa10.54□□□□□ -0.72
VPS33B-206ENST00000557358 NUPL2O15504 423 aaKnown RBP10.53□□□□□ -0.72
VPS33B-206ENST00000557358 TGOLN2O43493 480 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 HLA-AP01891 365 aaKnown RBP10.53□□□□□ -0.72
VPS33B-206ENST00000557358 IL5P05113 134 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 VAMP1P23763 118 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 MFAP4P55083 255 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 RELQ04864 619 aaPredicted RBP10.53□□□□□ -0.72
VPS33B-206ENST00000557358 TMEM268Q5VZI3 342 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 LYG2Q86SG7 212 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 ZNF114Q8NC26 417 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 IL22RA2Q969J5 263 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 MARC2Q969Z3 335 aa10.53□□□□□ -0.72
VPS33B-206ENST00000557358 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
VPS33B-206ENST00000557358 LSM4Q9Y4Z0 139 aaKnown RBP10.53□□□□□ -0.72
VPS33B-206ENST00000557358 DNAH3Q8TD57 4116 aa10.52□□□□□ -0.72
VPS33B-206ENST00000557358 C9orf170A2RU37 121 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 OR2T8A6NH00 312 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 C2orf70A6NJV1 201 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 DBX1A6NMT0 343 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 ST8SIA3O43173 380 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 SFT2D2O95562 160 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 FOLR2P14207 255 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 SPCS3P61009 180 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 SUPT4H1P63272 117 aaKnown RBP10.52□□□□□ -0.73
VPS33B-206ENST00000557358 DHRS2Q13268 280 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 LGI3Q8N145 548 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 SCARB1Q8WTV0 552 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 GLYATL2Q8WU03 294 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 PINX1Q96BK5 328 aaKnown RBP10.52□□□□□ -0.73
VPS33B-206ENST00000557358 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 TXN2Q99757 166 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 SEC22CQ9BRL7 303 aa10.52□□□□□ -0.73
VPS33B-206ENST00000557358 A0A0B4J293 547 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 C7orf66A4D0T2 115 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 NPBWR1P48145 328 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 ELLP55199 621 aaPredicted RBP10.51□□□□□ -0.73
VPS33B-206ENST00000557358 IZUMO4Q1ZYL8 232 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 IL34Q6ZMJ4 242 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 Q6ZNX1 250 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 NOXA1Q86UR1 476 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 SELENOHQ8IZQ5 122 aaKnown RBP10.51□□□□□ -0.73
VPS33B-206ENST00000557358 OR52B4Q8NGK2 314 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 OR52E5Q8NH55 327 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 ZNF431Q8TF32 576 aaPredicted RBP10.51□□□□□ -0.73
VPS33B-206ENST00000557358 TUBA4BQ9H853 241 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 ZC4H2Q9NQZ6 224 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 ALG5Q9Y673 324 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
VPS33B-206ENST00000557358 IGHV3-21A0A0B4J1V1 117 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 CEBPZOSA8MTT3 80 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 A8MWP6 167 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 INS-IGF2F8WCM5 200 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 NDUFA4O00483 81 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 GNG7O60262 68 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 P0C879 139 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 SULT1A3P0DMM9 295 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 SULT1A4P0DMN0 295 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 CBLN1P23435 193 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 GUCA2BQ16661 112 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 ANKRD55Q3KP44 614 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 SPINK9Q5DT21 86 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 HIPK2Q9H2X6 1198 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 HEYLQ9NQ87 328 aaPredicted RBP10.5□□□□□ -0.73
VPS33B-206ENST00000557358 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
VPS33B-206ENST00000557358 CACNG5Q9UF02 275 aa10.5□□□□□ -0.73
VPS33B-206ENST00000557358 A0A0B4J2A0 478 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 SNRPGP15A8MWD9 76 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 K7EIM0 57 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 MT-CO2P00403 227 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 BMI1P35226 326 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 HTR2BP41595 481 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 TMEM187Q14656 261 aa10.49□□□□□ -0.73
VPS33B-206ENST00000557358 CD300EQ496F6 205 aaPredicted RBP10.49□□□□□ -0.73
VPS33B-206ENST00000557358 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms