RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 C21orf62Q9NYP8 219 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 KCNIP3Q9Y2W7 256 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 TMEM56-RWDD3S4R434 201 aa9.4□□□□□ -0.9
TRAPPC6B-205ENST00000555269 LINC00854A0A1B0GVQ3 168 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ZNF785A8K8V0 405 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 I3L2K1 104 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CYB5BO43169 146 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TGOLN2O43493 480 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CBLN1P23435 193 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ADMP35318 185 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 AP3S2P59780 193 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 MLANAQ16655 118 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ZNF57Q68EA5 555 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SLC35G3Q8N808 338 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 UBAC2Q8NBM4 344 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 OR1L6Q8NGR2 347 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SDHCQ99643 169 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 NDUFA13Q9P0J0 144 aa9.39□□□□□ -0.91
TRAPPC6B-205ENST00000555269 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 NXPH3O95157 252 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 MT-CO2P00403 227 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CTSGP08311 255 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 FAUP35544 74 aaKnown RBP9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SNCAP37840 140 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CCR6P51684 374 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 DCTN2Q13561 401 aaKnown RBP9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 Q56UQ5 140 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 LYZL2Q7Z4W2 148 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TMED4Q7Z7H5 227 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 UXS1Q8NBZ7 420 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 PINX1Q96BK5 328 aaKnown RBP9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CACNG5Q9UF02 275 aa9.38□□□□□ -0.91
TRAPPC6B-205ENST00000555269 FRMD6-AS1P0C7T7 363 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SPCS3P61009 180 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 LCN12Q6JVE5 192 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ZNF114Q8NC26 417 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 DYNLRB2Q8TF09 96 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 BSCL2Q96G97 398 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ZNF414Q96IQ9 312 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 PDCD10Q9BUL8 212 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ZNF436Q9C0F3 470 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 MLXQ9UH92 298 aa9.37□□□□□ -0.91
TRAPPC6B-205ENST00000555269 INS-IGF2F8WCM5 200 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ZNF207O43670 478 aaKnown RBP9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 IGHV4-30-4P0DP06 118 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 MFAP4P55083 255 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 WDR89Q96FK6 387 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 C20orf24Q9BUV8 137 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ENY2Q9NPA8 101 aa9.36□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CEBPZOSA8MTT3 80 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 A8MWP6 167 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 CD7P09564 240 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 INPP1P49441 399 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TMEM128Q5BJH2 165 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 PVRIGQ6DKI7 326 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SPSB3Q6PJ21 355 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 BTNL8Q6UX41 500 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 OR2K2Q8NGT1 345 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 OR52E5Q8NH55 327 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 IL22RA2Q969J5 263 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SLC25A21Q9BQT8 299 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 FNDC4Q9H6D8 234 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 MRPL36Q9P0J6 103 aaKnown RBP9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 FLVCR2Q9UPI3 526 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
TRAPPC6B-205ENST00000555269 A0A0B4J2A0 478 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 NDUFA4O00483 81 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SCAF4O95104 1147 aaKnown RBP9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 NHLRC4P0CG21 123 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SULT1A3P0DMM9 295 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SULT1A4P0DMN0 295 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 VAMP1P23763 118 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SUB1P53999 127 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 PPP1R1AQ13522 171 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 NMSQ5H8A3 153 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TRIQKQ629K1 86 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TMEM61Q8N0U2 210 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 LGI3Q8N145 548 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TMEM190Q8WZ59 177 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 TXN2Q99757 166 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 PALMDQ9NP74 551 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 HEYLQ9NQ87 328 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 C19orf73Q9NVV2 129 aa9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 MRPL27Q9P0M9 148 aaKnown RBP9.34□□□□□ -0.91
TRAPPC6B-205ENST00000555269 SHPKQ9UHJ6 478 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms