RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 LAIR2Q6ISS4 152 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 SECTM1Q8WVN6 248 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 MISP3Q96FF7 219 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 RAB40CQ96S21 281 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 PLEKHA2Q9HB19 425 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 PUS1Q9Y606 427 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCFD1-215ENST00000555259 V9GY05 133 aa6.8□□□□□ -1.32
SCFD1-215ENST00000555259 ARL6IP5O75915 188 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 MT-CO2P00403 227 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 CALRP27797 417 aaKnown RBP6.79□□□□□ -1.32
SCFD1-215ENST00000555259 CATR1Q13166 79 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 OXA1LQ15070 435 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 LYPD1Q8N2G4 141 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 MND1Q9BWT6 205 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 NSG2Q9Y328 171 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 OR51B2Q9Y5P1 312 aa6.79□□□□□ -1.32
SCFD1-215ENST00000555259 A0A1W2PS18 150 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 METTL21EPA6NDL7 271 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 MARCH11A6NNE9 402 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 RAB6AP20340 208 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 ARL6IP1Q15041 203 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 SPHARQ15513 63 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 PSMG4Q5JS54 123 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 HACD4Q5VWC8 232 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 ZBTB34Q8NCN2 500 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 OR13F1Q8NGS4 319 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 OR51H1Q8NH63 302 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 CYGBQ8WWM9 190 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 TMEM56Q96MV1 263 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 COMMD9Q9P000 198 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 ANXA10Q9UJ72 324 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 LSM2Q9Y333 95 aaKnown RBP6.78□□□□□ -1.32
SCFD1-215ENST00000555259 RFNGQ9Y644 331 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 A0A1B0GU03 582 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 NPPCP23582 126 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 P2RY1P47900 373 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 ERVK-16P61578 105 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 RPS25P62851 125 aaKnown RBP6.78□□□□□ -1.32
SCFD1-215ENST00000555259 CDNFQ49AH0 187 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 ZNF600Q6ZNG1 722 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 PQLC1Q8N2U9 271 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 BPIFB6Q8NFQ5 453 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 NUDCD2Q8WVJ2 157 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 FRZBQ92765 325 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 UFD1Q92890 307 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 PINX1Q96BK5 328 aaKnown RBP6.78□□□□□ -1.32
SCFD1-215ENST00000555259 PLCXD1Q9NUJ7 323 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 FKBP14Q9NWM8 211 aa6.78□□□□□ -1.32
SCFD1-215ENST00000555259 IGHV3OR16-12A0A075B7B8 117 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 HELTA6NFD8 242 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 DBX1A6NMT0 343 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 H3BMM0 161 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 ATP5HO75947 161 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 PPYP01298 95 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 BTF3P20290 206 aaKnown RBP6.77□□□□□ -1.33
SCFD1-215ENST00000555259 FCGR2CP31995 323 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 XGP55808 180 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 DHRS2Q13268 280 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 MOB3AQ96BX8 217 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 SLC5A7Q9GZV3 580 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 ATG5Q9H1Y0 275 aa6.77□□□□□ -1.33
SCFD1-215ENST00000555259 TMEM235A6NFC5 223 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 SNAPC5O75971 98 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 KRASP01116 189 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 PTHLHP12272 177 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 CRYBB3P26998 211 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 NPBWR1P48145 328 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 OR10A3P58181 314 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 KCTD21Q4G0X4 260 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 AADACL3Q5VUY0 350 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 ZNF818PQ6ZRF7 136 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 CADM3Q8N126 398 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 ZNF114Q8NC26 417 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 METTL26Q96S19 204 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 PRNDQ9UKY0 176 aa6.76□□□□□ -1.33
SCFD1-215ENST00000555259 YTHDF2Q9Y5A9 579 aaKnown RBP6.76□□□□□ -1.33
SCFD1-215ENST00000555259 IFITM5A6NNB3 132 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 J3QL48 77 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 SSX5O60225 188 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 GNAO1P09471 354 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 G6PCP35575 357 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 PPP5CP53041 499 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 ARPC4P59998 168 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 DAD1P61803 113 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 FABP5Q01469 135 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 TRAM1Q15629 374 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 OGFRL1Q5TC84 451 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-215ENST00000555259 GSG1LQ6UXU4 331 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 FKBP11Q9NYL4 201 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
SCFD1-215ENST00000555259 TMEM50AO95807 157 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 HLA-DRB4P13762 266 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 F2RP25116 425 aa6.74□□□□□ -1.33
SCFD1-215ENST00000555259 PSMA1P25786 263 aaKnown RBP6.74□□□□□ -1.33
SCFD1-215ENST00000555259 EIF2B2P49770 351 aaKnown RBP6.74□□□□□ -1.33
SCFD1-215ENST00000555259 CCL18P55774 89 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms