RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PSENENQ9NZ42 101 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 PLA2G2EQ9NZK7 142 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 CACFD1Q9UGQ2 172 aa8.54□□□□□ -1.04
SHMT2-218ENST00000555213 TSSC4Q9Y5U2 329 aaPredicted RBP8.54□□□□□ -1.04
SHMT2-218ENST00000555213 C15orf62A8K5M9 175 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 NUDT19A8MXV4 375 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 H3BUA1 57 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 CYB5BO43169 146 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 BCL2L11O43521 198 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 TSC22D2O75157 780 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 MED6O75586 246 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 IFNA17P01571 189 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 EGR2P11161 476 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-218ENST00000555213 PPIFP30405 207 aaKnown RBP8.53□□□□□ -1.04
SHMT2-218ENST00000555213 KRTAP10-3P60369 221 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 PRCDQ00LT1 54 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 BSXQ3C1V8 233 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 C19orf54Q5BKX5 351 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 C10orf99Q6UWK7 81 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 OR10W1Q8NGF6 305 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 FAM110DQ8TAY7 271 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-218ENST00000555213 HINT2Q9BX68 163 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 ARV1Q9H2C2 271 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 SLA2Q9H6Q3 261 aa8.53□□□□□ -1.04
SHMT2-218ENST00000555213 CEBPZOSA8MTT3 80 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 PRSS46E5RG02 174 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 H3BP45 60 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 RGS13O14921 159 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 CST7O76096 145 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 IGLV1-40P01703 118 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 APELAP0DMC3 54 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 PVALBP20472 110 aaPredicted RBP8.52□□□□□ -1.05
SHMT2-218ENST00000555213 PSMB8P28062 276 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 TPPP2P59282 170 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 RPL23AP62750 156 aaKnown RBP8.52□□□□□ -1.05
SHMT2-218ENST00000555213 VAMP2P63027 116 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 NSUN5P1Q3KNT7 163 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 SPANXN5Q5MJ07 72 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 TEX261Q6UWH6 196 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 RNF152Q8N8N0 203 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 OR4F17Q8NGA8 305 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 OR4F4Q96R69 305 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 ARPC5LQ9BPX5 153 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 PLEKHA3Q9HB20 300 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 FBXL17Q9UF56 701 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 U3KQ87 197 aa8.52□□□□□ -1.05
SHMT2-218ENST00000555213 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 NPIPB5A8MRT5 1133 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 TEX22C9J3V5 150 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 TRGV3P03979 118 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 RPLP1P05386 114 aaKnown RBP8.51□□□□□ -1.05
SHMT2-218ENST00000555213 METTL15P1P0C7V9 234 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 DEFA4P12838 97 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 NUP62P37198 522 aaPredicted RBP8.51□□□□□ -1.05
SHMT2-218ENST00000555213 SULT1A1P50225 295 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 CAV2P51636 162 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 WT1-ASQ06250 92 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 TCTEX1D4Q5JR98 221 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 RPL7L1Q6DKI1 246 aaKnown RBP8.51□□□□□ -1.05
SHMT2-218ENST00000555213 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 SLC51BQ86UW2 128 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 KLHL30-AS1Q8NEE0 82 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 ZNF680Q8NEM1 530 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 SMIM3Q9BZL3 60 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 SLC25A31Q9H0C2 315 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 ENY2Q9NPA8 101 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 TENM1Q9UKZ4 2725 aa8.51□□□□□ -1.05
SHMT2-218ENST00000555213 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 IGLC7A0M8Q6 106 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 TAAR5O14804 337 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 SOX15O60248 233 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 BRI3O95415 125 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
SHMT2-218ENST00000555213 AREGP15514 252 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-218ENST00000555213 RAB9AP51151 201 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 ASPHD1Q5U4P2 390 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 OR5C1Q8NGR4 320 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 STOML3Q8TAV4 291 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 C4orf3Q8WVX3 66 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 ST8SIA2Q92186 375 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 UBE2E2Q96LR5 201 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 MS4A10Q96PG2 267 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 CIB3Q96Q77 187 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-218ENST00000555213 HEYLQ9NQ87 328 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-218ENST00000555213 RFNGQ9Y644 331 aa8.5□□□□□ -1.05
SHMT2-218ENST00000555213 NBEAL1Q6ZS30 2694 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 KANTRA0A1W2PQU2 76 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 FAM223BA6NKX1 122 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 LY86O95711 162 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 OR13C7P0DN81 318 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 HIST1H1BP16401 226 aaKnown RBP8.49□□□□□ -1.05
SHMT2-218ENST00000555213 CDX1P47902 265 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-218ENST00000555213 MFAP2P55001 183 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 BAXQ07812 192 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 MLANAQ16655 118 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 LCNL1Q6ZST4 164 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms