RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MLANAQ16655 118 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 LINC00299Q6ZSB3 139 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 MRAPQ8TCY5 172 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 VN1R17PQ8TDU5 208 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 C7orf50Q9BRJ6 194 aaKnown RBP9.4□□□□□ -0.9
SYNE2-214ENST00000554928 CHRDL1Q9BU40 450 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 CCDC32Q9BV29 185 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 BATF3Q9NR55 127 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.4□□□□□ -0.9
SYNE2-214ENST00000554928 MRPL36Q9P0J6 103 aaKnown RBP9.4□□□□□ -0.9
SYNE2-214ENST00000554928 SHPKQ9UHJ6 478 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 C9orf170A2RU37 121 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 INS-IGF2F8WCM5 200 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 GGCTO75223 188 aaKnown RBP9.39□□□□□ -0.91
SYNE2-214ENST00000554928 MT-CO2P00403 227 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 SULT1A3P0DMM9 295 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 SULT1A4P0DMN0 295 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 ANXA3P12429 323 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 SPNP16150 400 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 ADMP35318 185 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 SPCS3P61009 180 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 UBE2MP61081 183 aaKnown RBP9.39□□□□□ -0.91
SYNE2-214ENST00000554928 ERHP84090 104 aaKnown RBP9.39□□□□□ -0.91
SYNE2-214ENST00000554928 BSXQ3C1V8 233 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 OR52B4Q8NGK2 314 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 PINX1Q96BK5 328 aaKnown RBP9.39□□□□□ -0.91
SYNE2-214ENST00000554928 CXorf58Q96LI9 332 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 C21orf62Q9NYP8 219 aa9.39□□□□□ -0.91
SYNE2-214ENST00000554928 IGHV3OR16-8A0A075B7F1 116 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 IZUMO1RA6ND01 250 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 CENPXA8MT69 81 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 MPTX1A8MV57 137 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 TGOLN2O43493 480 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 ADAP1O75689 374 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 IGLV1-51P01701 117 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 HOXB5P09067 269 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 OR4E1P0C645 316 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 DHRS2Q13268 280 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 SMCO1Q147U7 214 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 LRTM2Q8N967 370 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 UBAC2Q8NBM4 344 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 OR52E5Q8NH55 327 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 S100ZQ8WXG8 99 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 OR4C12Q96R67 309 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 PDCD10Q9BUL8 212 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 C20orf85Q9H1P6 137 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-214ENST00000554928 THYN1Q9P016 225 aa9.38□□□□□ -0.91
SYNE2-214ENST00000554928 TRAV6A0A075B6T7 132 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 PITX3O75364 302 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 TCRBP04435 133 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 INSL3P51460 131 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 SRPXP78539 464 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 TNFRSF9Q07011 255 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 Q56UQ5 140 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 FAM209BQ5JX69 171 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 GGNBP1Q5YKI7 109 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 REC114Q7Z4M0 266 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 LYG2Q86SG7 212 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 GPHB5Q86YW7 130 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 ELOVL1Q9BW60 279 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 RBKSQ9H477 322 aa9.37□□□□□ -0.91
SYNE2-214ENST00000554928 ZNF256Q9Y2P7 627 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-214ENST00000554928 HUWE1Q7Z6Z7 4374 aaKnown RBP9.36□□□□□ -0.91
SYNE2-214ENST00000554928 ZNF320A2RRD8 509 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 UPK1BO75841 260 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 LY86O95711 162 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 CTSGP08311 255 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 SNCAP37840 140 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 PLET1Q6UQ28 207 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 OR1L6Q8NGR2 347 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 OR1S1Q8NH92 325 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 SEC22CQ9BRL7 303 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 ZNF436Q9C0F3 470 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-214ENST00000554928 ENY2Q9NPA8 101 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 HEYLQ9NQ87 328 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-214ENST00000554928 HSPB7Q9UBY9 170 aa9.36□□□□□ -0.91
SYNE2-214ENST00000554928 A0A1B0GU03 582 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 DUXBA0A1W2PPF3 345 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 LGALS9O00182 355 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 CYB5BO43169 146 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
SYNE2-214ENST00000554928 FOLR2P14207 255 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 ASAH1Q13510 395 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 TATDN3Q17R31 274 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 C4orf46Q504U0 113 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 DEFB121Q5J5C9 76 aa9.35□□□□□ -0.91
SYNE2-214ENST00000554928 BSCL2Q96G97 398 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-214ENST00000554928 WDR12Q9GZL7 423 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms