RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 COX6A1P12074 109 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 MIFP14174 115 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 SBSPONQ8IVN8 264 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 RAB8BQ92930 207 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 DRC3Q9H069 523 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 MIXL1Q9H2W2 232 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 ADGRB2O60241 1585 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 PIK3R4Q99570 1358 aa0.43□□□□□ -2.34
SCFD1-214ENST00000554819 PEAK1Q9H792 1746 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 LRRN3E7EW58 273 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 INMT-MINDY4F8WBC2 141 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 H0Y980 276 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 CRYGAP11844 174 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 RAB5BP61020 215 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 RHOGP84095 191 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 MIR17HGQ75NE6 70 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 LRRC25Q8N386 305 aaPredicted RBP0.42□□□□□ -2.34
SCFD1-214ENST00000554819 TMEM156Q8N614 296 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 OR13C4Q8NGS5 318 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 AMELYQ99218 206 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 ULBP3Q9BZM4 244 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 USE1Q9NZ43 259 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 KIAA1109Q2LD37 5005 aa0.42□□□□□ -2.34
SCFD1-214ENST00000554819 SYNE2Q8WXH0 6885 aaKnown RBP0.42□□□□□ -2.34
SCFD1-214ENST00000554819 EML5Q05BV3 1969 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 NEBP20929 6669 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 IGKV1-5P01602 117 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 BAALC-AS2P0C853 105 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 RPS12P25398 132 aaKnown RBP0.41□□□□□ -2.34
SCFD1-214ENST00000554819 KHDC3LQ587J8 217 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 FAM151BQ6UXP7 276 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 BPIFA4PQ86YQ2 179 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 Q8N6K4 173 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 TMEM147Q9BVK8 224 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 OR51I1Q9H343 314 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 KIF13BQ9NQT8 1826 aa0.41□□□□□ -2.34
SCFD1-214ENST00000554819 EVC2Q86UK5 1308 aa0.4□□□□□ -2.34
SCFD1-214ENST00000554819 ZNF462Q96JM2 2506 aa0.4□□□□□ -2.34
SCFD1-214ENST00000554819 KMT2DO14686 5537 aa0.4□□□□□ -2.34
SCFD1-214ENST00000554819 FSIP2Q5CZC0 6907 aa0.4□□□□□ -2.34
SCFD1-214ENST00000554819 C9orf84Q5VXU9 1444 aa0.4□□□□□ -2.34
SCFD1-214ENST00000554819 EML6Q6ZMW3 1958 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 KCNK1O00180 336 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 INE1O15225 51 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 MAGEA2P43356 314 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 AP2S1P53680 142 aaPredicted RBP0.4□□□□□ -2.35
SCFD1-214ENST00000554819 HBA1P69905 142 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 PMAIP1Q13794 54 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 RHEBQ15382 184 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 SFXN4Q6P4A7 337 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 SPATA8Q6RVD6 105 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 CLVS1Q8IUQ0 354 aaPredicted RBP0.4□□□□□ -2.35
SCFD1-214ENST00000554819 ACER3Q9NUN7 267 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 RASL12Q9NYN1 266 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 TAS2R4Q9NYW5 299 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 LSM5Q9Y4Y9 91 aaKnown RBP0.4□□□□□ -2.35
SCFD1-214ENST00000554819 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
SCFD1-214ENST00000554819 MUC2Q02817 5179 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 TNRC6AQ8NDV7 1962 aaKnown RBP0.39□□□□□ -2.35
SCFD1-214ENST00000554819 TRBV6-8A0A0A6YYG3 113 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 TRAV1-1A0A0B4J248 108 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 OR2B3O76000 313 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 UBL3O95164 117 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 DEXIO95424 95 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 TCL1BO95988 128 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 OR5G3P0C626 314 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 SSR2P43308 183 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 PDPK2PQ6A1A2 396 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 LPCAT3Q6P1A2 487 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 CD200R1LQ6Q8B3 271 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 OR5A1Q8NGJ0 315 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 TERB2Q8NHR7 220 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 SFT2D1Q8WV19 159 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 DNAJC9Q8WXX5 260 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 OPTNQ96CV9 577 aa0.39□□□□□ -2.35
SCFD1-214ENST00000554819 A0A1W2PPM0 123 aa0.38□□□□□ -2.35
SCFD1-214ENST00000554819 IFNA10P01566 189 aa0.38□□□□□ -2.35
SCFD1-214ENST00000554819 OR51D1Q8NGF3 324 aa0.38□□□□□ -2.35
SCFD1-214ENST00000554819 IMP4Q96G21 291 aaKnown RBP0.38□□□□□ -2.35
SCFD1-214ENST00000554819 COMMD5Q9GZQ3 224 aa0.38□□□□□ -2.35
SCFD1-214ENST00000554819 XPNPEP1Q9NQW7 623 aa0.38□□□□□ -2.35
SCFD1-214ENST00000554819 PRTFDC1Q9NRG1 225 aa0.38□□□□□ -2.35
SCFD1-214ENST00000554819 SNRNP200O75643 2136 aaKnown RBP0.38□□□□□ -2.35
SCFD1-214ENST00000554819 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 SULT1B1O43704 296 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 DCTN3O75935 186 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 PROSCO94903 275 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 ISG15P05161 165 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 LPCAT4Q643R3 524 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 SIGLECL1Q8N7X8 197 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 C4orf3Q8WVX3 66 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 KLK6Q92876 244 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 BORCS5Q969J3 196 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 CFAP53Q96M91 514 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 TMEM70Q9BUB7 260 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 SLC39A9Q9NUM3 307 aa0.37□□□□□ -2.35
SCFD1-214ENST00000554819 FBXL12Q9NXK8 326 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms