RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MPLKIPQ8TAP9 179 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 PHYHIPQ92561 330 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 DGCR14Q96DF8 476 aaKnown RBP3.43□□□□□ -1.86
ATXN3-229ENST00000554672 ARHGAP5-AS1Q96IT6 56 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 GINS4Q9BRT9 223 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 SCRT1Q9BWW7 348 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 PECRQ9BY49 303 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 SLC25A32Q9H2D1 315 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 TMEM14BQ9NUH8 114 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 C21orf62Q9NYP8 219 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 CLEC2DQ9UHP7 191 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 PSORS1C1Q9UIG5 152 aa3.43□□□□□ -1.86
ATXN3-229ENST00000554672 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 TRAV2A0A0B4J234 112 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 EFCAB10A6NFE3 127 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 YIF1AO95070 293 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 CTSGP08311 255 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 SPART-AS1P0CW21 52 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 CD36P16671 472 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 RANBP1P43487 201 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 OR2B8PP59922 312 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 RPL30P62888 115 aaKnown RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 RELQ04864 619 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 P2RY14Q15391 338 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 ACSM3Q53FZ2 586 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 LEMD1Q68G75 181 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 KCTD9Q7L273 389 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 TCF24Q7RTU0 167 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 HSD17B13Q7Z5P4 300 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 SPATA12Q7Z6I5 190 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 TRPT1Q86TN4 253 aaKnown RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 LRRTM1Q86UE6 522 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 H1FOOQ8IZA3 346 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 C6orf223Q8N319 242 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 DHRSXQ8N5I4 330 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 OR56B1Q8NGI3 324 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 OR4S2Q8NH73 311 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 CYGBQ8WWM9 190 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 TMEM80Q96HE8 168 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 OR10C1Q96KK4 312 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 HSD17B10Q99714 261 aaKnown RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 COMMD5Q9GZQ3 224 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 MS4A6AQ9H2W1 248 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 DUSP21Q9H596 190 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 BET1LQ9NYM9 111 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 CELA1Q9UNI1 258 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 RBMX2Q9Y388 322 aaKnown RBP3.42□□□□□ -1.86
ATXN3-229ENST00000554672 TMED3Q9Y3Q3 217 aa3.42□□□□□ -1.86
ATXN3-229ENST00000554672 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 NBDYA0A0U1RRE5 68 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 PNMA8CA0A1B0GUJ8 204 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 IGLC7A0M8Q6 106 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 J3QRK9 145 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 UPK2O00526 184 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 NUPL2O15504 423 aaKnown RBP3.41□□□□□ -1.86
ATXN3-229ENST00000554672 HLA-DQB1P01920 261 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
ATXN3-229ENST00000554672 FCGR3AP08637 254 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 GNAO1P09471 354 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 CTXN2P0C2S0 81 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 TRAPPC2P0DI81 140 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 TRAPPC2BP0DI82 140 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 OR13C7P0DN81 318 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 BRWD1-AS2P59051 145 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 ST3GAL4Q11206 333 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 C2orf76Q3KRA6 126 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 Q56UQ5 140 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 OR2B11Q5JQS5 317 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 RBM48Q5RL73 367 aaKnown RBP3.41□□□□□ -1.86
ATXN3-229ENST00000554672 THOC7Q6I9Y2 204 aaKnown RBP3.41□□□□□ -1.86
ATXN3-229ENST00000554672 MZT2AQ6P582 158 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 Q6ZS49 121 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 MS4A15Q8N5U1 240 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 GDPD1Q8N9F7 314 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 ZNF555Q8NEP9 628 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 TCTEX1D2Q8WW35 142 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 TXN2Q99757 166 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 C1QTNF4Q9BXJ3 329 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
ATXN3-229ENST00000554672 KCNK15Q9H427 330 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 HRASLSQ9HDD0 168 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 CLEC5AQ9NY25 188 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 KCNK7Q9Y2U2 307 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 LSM2Q9Y333 95 aaKnown RBP3.41□□□□□ -1.86
ATXN3-229ENST00000554672 OR2W1Q9Y3N9 320 aa3.41□□□□□ -1.86
ATXN3-229ENST00000554672 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 IGHV3-21A0A0B4J1V1 117 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 TEX50A0A1B0GTY4 177 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 TEX48A0A1B0GUV7 120 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM189A5PLL7 270 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 SMIM9A6NGZ8 99 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 SLC17A2O00624 439 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 ST8SIA3O43173 380 aa3.4□□□□□ -1.87
ATXN3-229ENST00000554672 DENRO43583 198 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms