RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TFF3Q07654 80 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 EFNB3Q15768 340 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 TMEM14EPQ6UXP3 125 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 SLC25A48Q6ZT89 311 aaKnown RBP9.52□□□□□ -0.89
SHMT2-212ENST00000554467 SSX8Q7RTT4 187 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 MS4A10Q96PG2 267 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 A0A1W2PPR1 153 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.89
SHMT2-212ENST00000554467 UBE2G2P60604 165 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 SELENOTP62341 195 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 OR4A47Q6IF82 309 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 OR4S2Q8NH73 311 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 CORO2AQ92828 525 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 HEYLQ9NQ87 328 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-212ENST00000554467 LOC105371242A0A075B767 164 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 FAM90A26D6RGX4 464 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 TNFRSF13BO14836 293 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-212ENST00000554467 LINC00310P59036 64 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 RELBQ01201 579 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 OR4F5Q8NH21 305 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 IGFBPL1Q8WX77 278 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 OR4F4Q96R69 305 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 TP53TG3Q9ULZ0 132 aa9.52□□□□□ -0.89
SHMT2-212ENST00000554467 IGHV3-72A0A0B4J1Y9 119 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 COMPP49747 757 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-212ENST00000554467 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 TOMM20LQ6UXN7 152 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 OR10X1Q8NGY0 326 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 RRHO14718 337 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
SHMT2-212ENST00000554467 TCTEX1D1Q8N7M0 179 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 TMEM204Q9BSN7 226 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 NCOR1P1Q9H4R4 102 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 RNF114Q9Y508 228 aa9.51□□□□□ -0.89
SHMT2-212ENST00000554467 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 C15orf62A8K5M9 175 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 NDUFS7O75251 213 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 TAF15Q92804 592 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHMT2-212ENST00000554467 SLC35E1Q96K37 410 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 WDR61Q9GZS3 305 aaKnown RBP9.5□□□□□ -0.89
SHMT2-212ENST00000554467 RAB9BQ9NP90 201 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 SLC35D1Q9NTN3 355 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 ZFHX3Q15911 3703 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 IGKV1D-33P01593 117 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 IGKV1-33P01594 117 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 HNF1AP20823 631 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 LRRC75BQ2VPJ9 315 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 COL5A1-AS1Q5SY13 56 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 ZNF709Q8N972 641 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 PMS2P5A8MQ11 134 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 HRASP01112 189 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 THBS3P49746 956 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 MEF2CQ06413 473 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-212ENST00000554467 BSXQ3C1V8 233 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 FFAR4Q5NUL3 377 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 LEMD1Q68G75 181 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
SHMT2-212ENST00000554467 OR10P1Q8NGE3 313 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 LINC00574Q9H8X3 128 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 NAT8Q9UHE5 227 aa9.5□□□□□ -0.89
SHMT2-212ENST00000554467 K7EP13 123 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 TCF19Q9Y242 345 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 POLQO75417 2590 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 TYMSP04818 313 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 CYP2G1PQ6ZSU1 146 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 OR10G9Q8NGN4 311 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 OR10G7Q8NGN6 311 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 C20orf202A1L168 122 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 H7BYZ3 331 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 IFNA1P01562 189 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 COX7A1P24310 79 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 ACOT6Q3I5F7 207 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-212ENST00000554467 TMEM41BQ5BJD5 291 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 GCSAMLQ5JQS6 135 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 FAM122AQ96E09 287 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 P2RX4Q99571 388 aa9.49□□□□□ -0.89
SHMT2-212ENST00000554467 GRIFINA4D1Z8 144 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 RBFOX2O43251 390 aaKnown RBP eCLIP9.48□□□□□ -0.895e-15■■■■■ 33.3
SHMT2-212ENST00000554467 OR2T10Q8NGZ9 312 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 MBD3L1Q8WWY6 194 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 RITA1Q96K30 269 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 MANBALQ9NQG1 85 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 J3QR06 171 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 PAGE4O60829 102 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 IL3RAP26951 378 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 TMEM155Q4W5P6 130 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 VN1R17PQ8TDU5 208 aa9.48□□□□□ -0.89
SHMT2-212ENST00000554467 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 IGHV1-8P0DP01 117 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 PSMB3P49720 205 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 DLX6P56179 175 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-212ENST00000554467 OR10W1Q8NGF6 305 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
SHMT2-212ENST00000554467 CIB3Q96Q77 187 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms