RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 NUDCD2Q8WVJ2 157 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 RAB40CQ96S21 281 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 GINS3Q9BRX5 216 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 S100A14Q9HCY8 104 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 ANXA10Q9UJ72 324 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 IFITM5A6NNB3 132 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 H3BMM0 161 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 ARL6IP5O75915 188 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 MT-CO2P00403 227 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 PTHLHP12272 177 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 BTF3P20290 206 aaKnown RBP6.36□□□□□ -1.39
PRKCH-208ENST00000553846 CRYBB3P26998 211 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 CALRP27797 417 aaKnown RBP6.36□□□□□ -1.39
PRKCH-208ENST00000553846 FGF9P31371 208 aaPredicted RBP6.36□□□□□ -1.39
PRKCH-208ENST00000553846 TALDO1P37837 337 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 MFAP4P55083 255 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 ZNF818PQ6ZRF7 136 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 LYPD1Q8N2G4 141 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 SLC25A46Q96AG3 418 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 RNF167Q9H6Y7 350 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 XCL2Q9UBD3 114 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 RABAC1Q9UI14 185 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 NSG2Q9Y328 171 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 PUS1Q9Y606 427 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRKCH-208ENST00000553846 U3KQE9 123 aa6.36□□□□□ -1.39
PRKCH-208ENST00000553846 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
PRKCH-208ENST00000553846 TMEM189A5PLL7 270 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 TMEM235A6NFC5 223 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 PPYP01298 95 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 CDNFQ49AH0 187 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 Q5VSD8 79 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 ZNF600Q6ZNG1 722 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 ZNF709Q8N972 641 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 DMBX1Q8NFW5 382 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 OR51H1Q8NH63 302 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 SECTM1Q8WVN6 248 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 UFD1Q92890 307 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 NIPSNAP3BQ9BS92 247 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 OR51B2Q9Y5P1 312 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 DNAH8Q96JB1 4490 aa6.35□□□□□ -1.39
PRKCH-208ENST00000553846 TRAV1-2A0A0B4J238 106 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 TEX48A0A1B0GUV7 120 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 ERICH4A6NGS2 130 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 SMIM9A6NGZ8 99 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 GNRHRP30968 328 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 FCGR2CP31995 323 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 P2RY1P47900 373 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
PRKCH-208ENST00000553846 CATR1Q13166 79 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 ARL6IP1Q15041 203 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 RCN1Q15293 331 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 C15orf53Q8NAA6 179 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 BPIFB6Q8NFQ5 453 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 GLMPQ8WWB7 406 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 MISP3Q96FF7 219 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 C1QTNF4Q9BXJ3 329 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 MRPL36Q9P0J6 103 aaKnown RBP6.34□□□□□ -1.39
PRKCH-208ENST00000553846 RFNGQ9Y644 331 aa6.34□□□□□ -1.39
PRKCH-208ENST00000553846 METTL21EPA6NDL7 271 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 FAM90A26D6RGX4 464 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 GNG7O60262 68 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 TMEM50AO95807 157 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 IGKV1-17P01599 117 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 EIF4EP06730 217 aaKnown RBP6.33□□□□□ -1.4
PRKCH-208ENST00000553846 HLA-DRB4P13762 266 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 PSMA1P25786 263 aaKnown RBP6.33□□□□□ -1.4
PRKCH-208ENST00000553846 RANBP1P43487 201 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 PPP5CP53041 499 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 EMP1P54849 157 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 RPL11P62913 178 aaKnown RBP6.33□□□□□ -1.4
PRKCH-208ENST00000553846 TRAM1Q15629 374 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 KCTD21Q4G0X4 260 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 PSMG4Q5JS54 123 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 OGFRL1Q5TC84 451 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-208ENST00000553846 C10orf67Q8IYJ2 551 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 C8orf59Q8N0T1 100 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-208ENST00000553846 DHRSXQ8N5I4 330 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 FCAMRQ8WWV6 532 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 C18orf15Q96N68 181 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 HINT2Q9BX68 163 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 SLC5A7Q9GZV3 580 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 TMEM231Q9H6L2 316 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 PRNDQ9UKY0 176 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 HLA-DRB4X5D2U9 266 aa6.33□□□□□ -1.4
PRKCH-208ENST00000553846 HELTA6NFD8 242 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 HTN3P15516 51 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 F2RP25116 425 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 G6PCP35575 357 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 ALDH3B2P48448 385 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 PRCDQ00LT1 54 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 MLLT11Q13015 90 aaPredicted RBP6.32□□□□□ -1.4
PRKCH-208ENST00000553846 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
PRKCH-208ENST00000553846 C1orf158Q8N1D5 194 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 PACRGLQ8N7B6 248 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 BEST4Q8NFU0 473 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 TMEM56Q96MV1 263 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms