RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 IGHV3-35A0A0C4DH35 117 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 ZNF320A2RRD8 509 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 IZUMO1RA6ND01 250 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 LCN12Q6JVE5 192 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 SPSB3Q6PJ21 355 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 OR52E5Q8NH55 327 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 CACNG8Q8WXS5 425 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 CHRDL1Q9BU40 450 aa15.42■□□□□ 0.06
FOXA1-203ENST00000553751 MT-CO2P00403 227 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 RNASE2P10153 161 aaKnown RBP15.41■□□□□ 0.06
FOXA1-203ENST00000553751 ANXA3P12429 323 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 CBLN1P23435 193 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 ADMP35318 185 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 SNCAP37840 140 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 SPCS3P61009 180 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 CD300EQ496F6 205 aaPredicted RBP15.41■□□□□ 0.06
FOXA1-203ENST00000553751 Q56UQ5 140 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 PVRIGQ6DKI7 326 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 UBAC2Q8NBM4 344 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 DYNLRB2Q8TF09 96 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 TMEM190Q8WZ59 177 aa15.41■□□□□ 0.06
FOXA1-203ENST00000553751 A0A0B4J2A0 478 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 FCGR2BP31994 310 aaPredicted RBP15.4■□□□□ 0.06
FOXA1-203ENST00000553751 SRPXP78539 464 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 DEFB114Q30KQ6 69 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 BSXQ3C1V8 233 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 TMEM128Q5BJH2 165 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 NMSQ5H8A3 153 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 LYZL2Q7Z4W2 148 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 Q8N1Y9 231 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 PINX1Q96BK5 328 aaKnown RBP15.4■□□□□ 0.06
FOXA1-203ENST00000553751 ENY2Q9NPA8 101 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 SHPKQ9UHJ6 478 aa15.4■□□□□ 0.06
FOXA1-203ENST00000553751 CTSGP08311 255 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 INPP1P49441 399 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 CCR6P51684 374 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 RBMS2Q15434 407 aaKnown RBP15.39■□□□□ 0.05
FOXA1-203ENST00000553751 TM4SF20Q53R12 229 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 C11orf87Q6NUJ2 197 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 LGI3Q8N145 548 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 ZNF414Q96IQ9 312 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 PALMDQ9NP74 551 aa15.39■□□□□ 0.05
FOXA1-203ENST00000553751 TECRQ9NZ01 308 aaKnown RBP15.39■□□□□ 0.05
FOXA1-203ENST00000553751 NAP1L6A6NFF2 107 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 NDUFA4O00483 81 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 IGHV3-48P01763 117 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 SULT1A3P0DMM9 295 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 SULT1A4P0DMN0 295 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 IL7P13232 177 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 MFAP4P55083 255 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 UXS1Q8NBZ7 420 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 TXN2Q99757 166 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 GAR1Q9NY12 217 aaKnown RBP15.38■□□□□ 0.05
FOXA1-203ENST00000553751 MLXQ9UH92 298 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 UFC1Q9Y3C8 167 aa15.38■□□□□ 0.05
FOXA1-203ENST00000553751 C8orf88P0DMB2 117 aa15.37■□□□□ 0.05
FOXA1-203ENST00000553751 VAMP1P23763 118 aa15.37■□□□□ 0.05
FOXA1-203ENST00000553751 SUB1P53999 127 aaKnown RBP eCLIP15.37■□□□□ 0.05
FOXA1-203ENST00000553751 ELLP55199 621 aaPredicted RBP15.37■□□□□ 0.05
FOXA1-203ENST00000553751 ANKRD55Q3KP44 614 aa15.37■□□□□ 0.05
FOXA1-203ENST00000553751 CENPSQ8N2Z9 138 aa15.37■□□□□ 0.05
FOXA1-203ENST00000553751 ZNF785A8K8V0 405 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 CORTO00230 105 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 NDUFB6O95139 128 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 NXPH3O95157 252 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 FRMD6-AS1P0C7T7 363 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 BTCP35070 178 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 PPP1R1AQ13522 171 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 SMCO1Q147U7 214 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 LRTM2Q8N967 370 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 MARC2Q969Z3 335 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 DAZ1Q9NQZ3 744 aaKnown RBP15.36■□□□□ 0.05
FOXA1-203ENST00000553751 SELENOKQ9Y6D0 94 aa15.36■□□□□ 0.05
FOXA1-203ENST00000553751 LINC00854A0A1B0GVQ3 168 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 DUXBA0A1W2PPF3 345 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 NUPL2O15504 423 aaKnown RBP15.35■□□□□ 0.05
FOXA1-203ENST00000553751 SFT2D2O95562 160 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 IGHV4-30-4P0DP06 118 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 BTNL8Q6UX41 500 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 GTSCR1Q86UQ5 136 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 TMEM61Q8N0U2 210 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 WDR89Q96FK6 387 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-203ENST00000553751 ASCL2Q99929 193 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 FNDC4Q9H6D8 234 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-203ENST00000553751 HEYLQ9NQ87 328 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-203ENST00000553751 MRPL27Q9P0M9 148 aaKnown RBP15.35■□□□□ 0.05
FOXA1-203ENST00000553751 HSPB7Q9UBY9 170 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 CACFD1Q9UGQ2 172 aa15.35■□□□□ 0.05
FOXA1-203ENST00000553751 STAB2Q8WWQ8 2551 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 IGHV3OR16-8A0A075B7F1 116 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 PIGBOS1A0A0B4J2F0 54 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 CEBPZOSA8MTT3 80 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 GNG7O60262 68 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 NHLRC4P0CG21 123 aaPredicted RBP15.34■□□□□ 0.05
FOXA1-203ENST00000553751 HTR2BP41595 481 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 RELQ04864 619 aaPredicted RBP15.34■□□□□ 0.05
FOXA1-203ENST00000553751 TNFRSF9Q07011 255 aa15.34■□□□□ 0.05
FOXA1-203ENST00000553751 C7orf50Q9BRJ6 194 aaKnown RBP15.34■□□□□ 0.05
FOXA1-203ENST00000553751 A0A1B0GU03 582 aa15.33■□□□□ 0.04
FOXA1-203ENST00000553751 A6NHS1 94 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms