RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 UBE2E2Q96LR5 201 aa13.99□□□□□ -0.17
PSEN1-208ENST00000553719 ZNF355PQ9NSJ1 428 aa13.99□□□□□ -0.17
PSEN1-208ENST00000553719 ZFP57Q9NU63 452 aa13.99□□□□□ -0.17
PSEN1-208ENST00000553719 LSM5Q9Y4Y9 91 aaKnown RBP13.99□□□□□ -0.17
PSEN1-208ENST00000553719 A0A1B0GVG6 124 aa13.98□□□□□ -0.17
PSEN1-208ENST00000553719 I3L2K1 104 aa13.98□□□□□ -0.17
PSEN1-208ENST00000553719 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
PSEN1-208ENST00000553719 USMG5Q96IX5 58 aa13.98□□□□□ -0.17
PSEN1-208ENST00000553719 GNB4Q9HAV0 340 aa13.98□□□□□ -0.17
PSEN1-208ENST00000553719 TSSC4Q9Y5U2 329 aaPredicted RBP13.98□□□□□ -0.17
PSEN1-208ENST00000553719 TRAV14DV4A0A0A6YYC5 116 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 TCRBV4S1A1TA0A5B7 111 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 PRSS46E5RG02 174 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 G3V3Q6 166 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 TSC22D2O75157 780 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 MPC2O95563 127 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 SUB1P53999 127 aaKnown RBP eCLIP13.97□□□□□ -0.17
PSEN1-208ENST00000553719 S100A10P60903 97 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 C15orf32Q32M92 178 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 SLC25A24Q6NUK1 477 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 TMEM14EPQ6UXP3 125 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 FBXL7Q9UJT9 491 aa13.97□□□□□ -0.17
PSEN1-208ENST00000553719 A0A0G2JLM5 398 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 MFSD2BA6NFX1 497 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 PMS2P5A8MQ11 134 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 H3BP45 60 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 I3L521 148 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 CYB5BO43169 146 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 IFNA10P01566 189 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 LYL1P12980 280 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 RAP2BP61225 183 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 RUNX1Q01196 453 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 LRRC37A5PQ49AS3 106 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 NDUFA11Q86Y39 141 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 RNASEH2CQ8TDP1 164 aaKnown RBP13.96□□□□□ -0.17
PSEN1-208ENST00000553719 VN1R17PQ8TDU5 208 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 RNF126Q9BV68 326 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 FNDC4Q9H6D8 234 aaPredicted RBP13.96□□□□□ -0.17
PSEN1-208ENST00000553719 PSENENQ9NZ42 101 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 OR5AC2Q9NZP5 309 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 THYN1Q9P016 225 aa13.96□□□□□ -0.17
PSEN1-208ENST00000553719 CMYA5Q8N3K9 4069 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 VWFP04275 2813 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 F8W735 103 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-208ENST00000553719 CORTO00230 105 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 EXOSC2Q13868 293 aaKnown RBP13.95□□□□□ -0.18
PSEN1-208ENST00000553719 ZNF343Q6P1L6 599 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 PRSS54Q6PEW0 395 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 SHISA2Q6UWI4 295 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 NOXA1Q86UR1 476 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 C3orf56Q8N813 242 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 C4orf3Q8WVX3 66 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 CCDC140Q96MF4 163 aa13.95□□□□□ -0.18
PSEN1-208ENST00000553719 LYRM2Q9NU23 88 aaPredicted RBP13.95□□□□□ -0.18
PSEN1-208ENST00000553719 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
PSEN1-208ENST00000553719 hCG_2014768A0A024R1R8 64 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 MT-CO2P00403 227 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 LGALS1P09382 135 aaKnown RBP13.94□□□□□ -0.18
PSEN1-208ENST00000553719 FCGR2BP31994 310 aaPredicted RBP13.94□□□□□ -0.18
PSEN1-208ENST00000553719 RPP30P78346 268 aaKnown RBP13.94□□□□□ -0.18
PSEN1-208ENST00000553719 ATP5G2Q06055 141 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 Q5BKY6 102 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 SPANXN5Q5MJ07 72 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 ZNF502Q8TBZ5 544 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 SCARB1Q8WTV0 552 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 MISP3Q96FF7 219 aa13.94□□□□□ -0.18
PSEN1-208ENST00000553719 E5RGE8 158 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 IGHV3-11P01762 117 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 PVALBP20472 110 aaPredicted RBP13.93□□□□□ -0.18
PSEN1-208ENST00000553719 BCAP31P51572 246 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 KHDC1LQ5JSQ8 128 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 HAPLN4Q86UW8 402 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 CXorf58Q96LI9 332 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 ATP6V0BQ99437 205 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 MRPL36Q9P0J6 103 aaKnown RBP13.93□□□□□ -0.18
PSEN1-208ENST00000553719 MBD2Q9UBB5 411 aa13.93□□□□□ -0.18
PSEN1-208ENST00000553719 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.92□□□□□ -0.18
PSEN1-208ENST00000553719 IGHV3-21A0A0B4J1V1 117 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 IGSF23A1L1A6 192 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 L7N2F9 121 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 CCNKO75909 580 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 OR8U8P0C7N1 319 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 PET100P0DJ07 73 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 P2RY1P47900 373 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 RAB11AP62491 216 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 VAMP2P63027 116 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 CD69Q07108 199 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 FHL3Q13643 280 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 MLANAQ16655 118 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 ETV3LQ6ZN32 361 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 KLHL30-AS1Q8NEE0 82 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 OR2T35Q8NGX2 323 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 EEF1AKMT3Q96AZ1 226 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 PINX1Q96BK5 328 aaKnown RBP13.92□□□□□ -0.18
PSEN1-208ENST00000553719 ST6GAL2Q96JF0 529 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 S4R3C0 116 aa13.92□□□□□ -0.18
PSEN1-208ENST00000553719 TRBV7-1A0A0A6YYK4 115 aa13.91□□□□□ -0.18
PSEN1-208ENST00000553719 FAM24AA6NFZ4 105 aa13.91□□□□□ -0.18
PSEN1-208ENST00000553719 TRBV12-3P01733 135 aa13.91□□□□□ -0.18
PSEN1-208ENST00000553719 RLN2P04090 185 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms