RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	TLCD1	Q96CP7	247 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	FEV	Q99581	238 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	TBX5	Q99593	518 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	NIPSNAP1	Q9BPW8	284 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	UQCC2	Q9BRT2	126 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	REEP1	Q9H902	201 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	EFCAB1	Q9HAE3	211 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686		Q9N2K0	584 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	ZNF586	Q9NXT0	402 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	TVP23B	Q9NYZ1	205 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	KLK9	Q9UKQ9	250 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	SAMHD1	Q9Y3Z3	626 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	RFNG	Q9Y644	331 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	PKHD1L1	Q86WI1	4243 aa		3.98	□□□□□ -1.77
ATXN3-223	ENST00000553686	IGHV7-4-1	A0A0J9YVY3	117 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686		A0A0U1RQV1	116 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686		A0A1W2PQL4	384 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	C1QB	P02746	253 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	EIF4E	P06730	217 aa	Known RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	C4BPB	P20851	252 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	FGF9	P31371	208 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	ATP6V1E1	P36543	226 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	CEACAM6	P40199	344 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	PSMD7	P51665	324 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	LINC00315	P59091	139 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	MAGOH	P61326	146 aa	Known RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	PPP1R8	Q12972	351 aa	Known RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	GK3P	Q14409	553 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	HMGN3	Q15651	99 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	CEACAM19	Q7Z692	300 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	ZNF502	Q8TBZ5	544 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	BSCL2	Q96G97	398 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	NSMCE2	Q96MF7	247 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	ATP6V0B	Q99437	205 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	PRRG3	Q9BZD7	231 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686	GNG8	Q9UK08	70 aa		3.97	□□□□□ -1.77
ATXN3-223	ENST00000553686		A0A087WTM6	91 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	TRAV14DV4	A0A0A6YYC5	116 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	MFSD2B	A6NFX1	497 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	RS1	O15537	224 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	ZNF207	O43670	478 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	ATP5H	O75947	161 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	HTR1A	P08908	422 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	ZNF93	P35789	620 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	MNAT1	P51948	309 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	CDK10	Q15131	360 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	ACTL10	Q5JWF8	245 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	UBE2U	Q5VVX9	321 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	HACD2	Q6Y1H2	254 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	IDO2	Q6ZQW0	420 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686		Q6ZRN7	208 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	SSX6	Q7RTT6	188 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	TCF24	Q7RTU0	167 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	CCDC197	Q8NCU1	140 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR51A4	Q8NGJ6	313 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	MRPL30	Q8TCC3	161 aa	Known RBP	3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	VN1R17P	Q8TDU5	208 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	GIPC3	Q8TF64	312 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	DYDC1	Q8WWB3	177 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	GGH	Q92820	318 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	PTX4	Q96A99	478 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	MYCBP	Q99417	103 aa	Predicted RBP	3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	UPK3B	Q9BT76	320 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	THTPA	Q9BU02	230 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	MS4A6A	Q9H2W1	248 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	SAR1A	Q9NR31	198 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	XCL2	Q9UBD3	114 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	MUC2	Q02817	5179 aa		3.96	□□□□□ -1.78
ATXN3-223	ENST00000553686	IGLV11-55	A0A075B6I3	123 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR2T8	A6NH00	312 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	KNCN	A6PVL3	124 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ZNF705F	A8MVS1	300 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686		F5H768	121 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	YIF1A	O95070	293 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	BAG2	O95816	211 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ZNF705D	P0CH99	300 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ZNF705B	P0CI00	300 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ANXA8	P13928	327 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	GATA1	P15976	413 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	MAS1L	P35410	378 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	RPL27A	P46776	148 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR2B8P	P59922	312 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	TMEM69	Q5SWH9	247 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	TMEM236	Q5W0B7	351 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR2T5	Q6IEZ7	315 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	GID4	Q8IVV7	300 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	THAP8	Q8NA92	274 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR10H4	Q8NGA5	316 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	OR2T29	Q8NH02	315 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	DGCR14	Q96DF8	476 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ADTRP	Q96IZ2	230 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	ISG20L2	Q9H9L3	353 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	TMEM138	Q9NPI0	162 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	BATF3	Q9NR55	127 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	WARS2	Q9UGM6	360 aa	Known RBP	3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	RABAC1	Q9UI14	185 aa		3.95	□□□□□ -1.78
ATXN3-223	ENST00000553686	IGHV3OR16-12	A0A075B7B8	117 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms