RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PGLYRP1O75594 196 aaPredicted RBP6.54□□□□□ -1.36
SYNE2-209ENST00000553308 CD5P06127 495 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 P0DMU3 169 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 FAM231AP0DMU4 169 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 FAM231CP0DMU5 169 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 SPP1P10451 314 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 F2RP25116 425 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 HERV-K104P61576 105 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 TMEM41BQ5BJD5 291 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 SFXN4Q6P4A7 337 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 CENPSQ8N2Z9 138 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 OR5H6Q8NGV6 325 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
SYNE2-209ENST00000553308 TXN2Q99757 166 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 TMEM14BQ9NUH8 114 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 TXNL4BQ9NX01 149 aaKnown RBP6.54□□□□□ -1.36
SYNE2-209ENST00000553308 PRNDQ9UKY0 176 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 RRP15Q9Y3B9 282 aaKnown RBP6.54□□□□□ -1.36
SYNE2-209ENST00000553308 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 AGRNO00468 2067 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 IGLV2-18A0A075B6J9 118 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 A0A1B0GU03 582 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 K7EQG2 157 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 ZNF688P0C7X2 276 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 LGALS9BQ3B8N2 356 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 UBE2UQ5VVX9 321 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 MORN3Q6PF18 240 aaPredicted RBP6.53□□□□□ -1.36
SYNE2-209ENST00000553308 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 CSNK1G2-AS1Q8NCQ2 148 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 DUSP18Q8NEJ0 188 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 STXBP6Q8NFX7 210 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 TSPAN14Q8NG11 270 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 OR5AP2Q8NGF4 316 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 NRG4Q8WWG1 115 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 MOB3AQ96BX8 217 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 FKBP11Q9NYL4 201 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 EHFQ9NZC4 300 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 PLA2G2EQ9NZK7 142 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 TBC1D24Q9ULP9 559 aa6.53□□□□□ -1.36
SYNE2-209ENST00000553308 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
SYNE2-209ENST00000553308 DNAH2Q9P225 4427 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 CLEC2LP0C7M8 214 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 FGF9P31371 208 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-209ENST00000553308 RFX2P48378 723 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 ACTL10Q5JWF8 245 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 ZNF600Q6ZNG1 722 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 Q6ZR54 194 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 TPRA1Q86W33 373 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 CADM3Q8N126 398 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 BORCS5Q969J3 196 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 TSC22D3Q99576 134 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 ZNF2Q9BSG1 426 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-209ENST00000553308 FXYD6Q9H0Q3 95 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 AUNIPQ9H7T9 357 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
SYNE2-209ENST00000553308 CD74P04233 296 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 SDC2P34741 201 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 P2RY1P47900 373 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 PPP5CP53041 499 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 PRCDQ00LT1 54 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 MXD1Q05195 221 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 Q6ZRM9 215 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 GRAMD2BQ96HH9 432 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 IFT46Q9NQC8 304 aa6.51□□□□□ -1.37
SYNE2-209ENST00000553308 A0A0A6YYH2 397 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 A6NJ64 397 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 GPR31O00270 319 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 IFNA10P01566 189 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 PMP2P02689 132 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 NPPCP23582 126 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 PSMB9P28065 219 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 CBX5P45973 191 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 NPBWR1P48145 328 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 SCAND1P57086 179 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 IZUMO4Q1ZYL8 232 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 PHLDA2Q53GA4 152 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 IDNKQ5T6J7 187 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 DHRS11Q6UWP2 260 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 H2BFWTQ7Z2G1 175 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 CMTM1Q8IZ96 169 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 OR4A16Q8NH70 328 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 SEC22AQ96IW7 307 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 CNBD2Q96M20 576 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 RNF167Q9H6Y7 350 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 MRPL36Q9P0J6 103 aaKnown RBP6.5□□□□□ -1.37
SYNE2-209ENST00000553308 BLOC1S6Q9UL45 172 aa6.5□□□□□ -1.37
SYNE2-209ENST00000553308 A0A1W2PS18 150 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 TMEM50AO95807 157 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 IFNA21P01568 189 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 IFNA17P01571 189 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 NPY1RP25929 384 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 CRYBB3P26998 211 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 HSPE1P61604 102 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms