RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 ATP1B3P54709 279 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 CDC42P60953 191 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 CXCR4P61073 352 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 RIPK1Q13546 671 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 GINS1Q14691 196 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 RPEL1Q2QD12 228 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 ZNF829Q3KNS6 432 aaPredicted RBP2.57□□□□□ -2
ATXN3-217ENST00000553287 LINC01620Q4KN68 170 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 SPIN3Q5JUX0 258 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 RAB12Q6IQ22 244 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 FAM131AQ6UXB0 335 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 LINC00596Q86U02 117 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 APRG1Q8IVJ8 170 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 ZNF679Q8IYX0 411 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 TMEM61Q8N0U2 210 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 ZNF565Q8N9K5 539 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 OR52B4Q8NGK2 314 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 OR13C9Q8NGT0 318 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 OR4K15Q8NH41 348 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 TCTEX1D2Q8WW35 142 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.57□□□□□ -2
ATXN3-217ENST00000553287 TLCD1Q96CP7 247 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 PYURFQ96I23 114 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 HDHD3Q9BSH5 251 aaPredicted RBP2.57□□□□□ -2
ATXN3-217ENST00000553287 MROQ9BYG7 248 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 SAR1AQ9NR31 198 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 PEF1Q9UBV8 284 aaKnown RBP2.57□□□□□ -2
ATXN3-217ENST00000553287 ING4Q9UNL4 249 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 R4GMQ9 66 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 VPS13BQ7Z7G8 4022 aa2.57□□□□□ -2
ATXN3-217ENST00000553287 LOC107986453A0A1B0GWG9 222 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 C2orf70A6NJV1 201 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 C11orf94C9JXX5 98 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 NDUFA3O95167 84 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 CDRT1O95170 752 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 HBZP02008 142 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 CSN2P05814 226 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 CHTF8P0CG12 524 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 COX4I1P13073 169 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 ATF1P18846 271 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 IL3RAP26951 378 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 PPP1CCP36873 323 aaKnown RBP2.56□□□□□ -2
ATXN3-217ENST00000553287 IFNGR2P38484 337 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 BLVRAP53004 296 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 SMIM11AP58511 58 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 TAS2R19P59542 299 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 PSME3P61289 254 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 SELENOTP62341 195 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 HAMPP81172 84 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 LINC00483Q53H64 154 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 RPL39P5Q59GN2 51 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 METTL21CQ5VZV1 264 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 ZNF322Q6U7Q0 402 aaPredicted RBP2.56□□□□□ -2
ATXN3-217ENST00000553287 ERASQ7Z444 233 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 TMEM17Q86X19 198 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 SLC35F2Q8IXU6 374 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 Q8IYB0 196 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 HS3ST5Q8IZT8 346 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 DRAXINQ8NBI3 349 aaPredicted RBP2.56□□□□□ -2
ATXN3-217ENST00000553287 NPBQ8NG41 125 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 TEX47Q8TBZ9 253 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 DYDC1Q8WWB3 177 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 OPALINQ96PE5 141 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 RARRES2Q99969 163 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 YIPF3Q9GZM5 350 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 CHST5Q9GZS9 411 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 LINC00574Q9H8X3 128 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 TMBIM4Q9HC24 238 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 COA4Q9NYJ1 87 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 GNG12Q9UBI6 72 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 METTL1Q9UBP6 276 aaKnown RBP2.56□□□□□ -2
ATXN3-217ENST00000553287 BLOC1S6Q9UL45 172 aa2.56□□□□□ -2
ATXN3-217ENST00000553287 IGHV3OR16-13A0A075B7E8 117 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 IGHV3OR16-8A0A075B7F1 116 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 BBIP1A8MTZ0 92 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 H7C2Y5 167 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 GEMIN2O14893 280 aaKnown RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 PRKYO43930 277 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 EDF1O60869 148 aaKnown RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 GATBO75879 557 aaKnown RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 OR2A4O95047 310 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 SERPINA3P01011 423 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 NPPAP01160 153 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 SMR3BP02814 79 aaPredicted RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 MT-ND4P03905 459 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 OCM2P0CE71 109 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 OCMP0CE72 109 aaPredicted RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 SAA2P0DJI9 122 aaPredicted RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 IGFBP3P17936 291 aaPredicted RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 CCL1P22362 96 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 CBLN1P23435 193 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 FXYD3Q14802 87 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 PSG5Q15238 335 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 TP53I3Q53FA7 332 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 AKIRIN2Q53H80 203 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 SYT6Q5T7P8 510 aaPredicted RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 ZNF660Q6AZW8 331 aaPredicted RBP2.55□□□□□ -2
ATXN3-217ENST00000553287 RPL13AP3Q6NVV1 102 aa2.55□□□□□ -2
ATXN3-217ENST00000553287 FAHD1Q6P587 224 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms