RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CYSLTR1Q9Y271 337 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 TOPBP1Q92547 1522 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 CACNA1GO43497 2377 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 PXDNLA1KZ92 1463 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 MYO9BQ13459 2157 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 OR51F1A6NGY5 319 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 NAPSAO96009 420 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 CDC42P60953 191 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 LRRC28Q86X40 367 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-209ENST00000553280 OR11H6Q8NGC7 330 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 SPACA4Q8TDM5 124 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 C11orf40Q8WZ69 217 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 AP3S1Q92572 193 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 SCGB3A1Q96QR1 104 aa2.19□□□□□ -2.06
SCFD1-209ENST00000553280 MEIS3P1A6NDR6 274 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 SULT1B1O43704 296 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 ERP29P30040 261 aaKnown RBP2.18□□□□□ -2.06
SCFD1-209ENST00000553280 EIF2B2P49770 351 aaKnown RBP2.18□□□□□ -2.06
SCFD1-209ENST00000553280 SLC38A11Q08AI6 406 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 NDUFA5Q16718 116 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 MIR17HGQ75NE6 70 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 KRTAP13-1Q8IUC0 172 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 PFN4Q8NHR9 129 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 GPR146Q96CH1 333 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 C2orf50Q96LR7 162 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 RNF122Q9H9V4 155 aa2.18□□□□□ -2.06
SCFD1-209ENST00000553280 CIAO1O76071 339 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 TRGC1P0CF51 173 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 SMIM17P0DL12 118 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 AQP4P55087 323 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 HSPE1P61604 102 aaKnown RBP2.17□□□□□ -2.06
SCFD1-209ENST00000553280 KRR1Q13601 381 aaKnown RBP2.17□□□□□ -2.06
SCFD1-209ENST00000553280 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 Q6Q795 121 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 BPIFA4PQ86YQ2 179 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 HSPB9Q9BQS6 159 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 SLC39A9Q9NUM3 307 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 TVP23BQ9NYZ1 205 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 ERGIC3Q9Y282 383 aa2.17□□□□□ -2.06
SCFD1-209ENST00000553280 MAST2Q6P0Q8 1798 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 ZNF860A6NHJ4 632 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 C19orf84I3L1E1 186 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 CLPSP04118 112 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 DEFB103AP81534 67 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 RPL19P84098 196 aaKnown RBP2.16□□□□□ -2.06
SCFD1-209ENST00000553280 GOLT1AQ6ZVE7 132 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 LYG2Q86SG7 212 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 CLVS1Q8IUQ0 354 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-209ENST00000553280 SLC25A40Q8TBP6 338 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 DISP1Q96F81 1524 aa2.16□□□□□ -2.06
SCFD1-209ENST00000553280 VWDEQ8N2E2 1590 aa2.15□□□□□ -2.06
SCFD1-209ENST00000553280 KIF24Q5T7B8 1368 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 TRAV4A0A0B4J268 109 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 TRAPPC13A5PLN9 417 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 TMEM238C9JI98 176 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 E5RI56 91 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 OR5F1O95221 314 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 C1QCP02747 245 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 S100A4P26447 101 aaKnown RBP2.15□□□□□ -2.07
SCFD1-209ENST00000553280 SERPINB9P50453 376 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 POU6F1Q14863 301 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 TMED4Q7Z7H5 227 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 HIST3H2BBQ8N257 126 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 DNAJC9Q8WXX5 260 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 TMEM106AQ96A25 262 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 PRRT1Q99946 306 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 C8orf4Q9NR00 106 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 CKLFQ9UBR5 152 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 SMARCA4P51532 1647 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 DOCK5Q9H7D0 1870 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 STRCP1A6NGW2 1772 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 CUL9Q8IWT3 2517 aa2.15□□□□□ -2.07
SCFD1-209ENST00000553280 J3QRK9 145 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 HMGB3O15347 200 aaKnown RBP2.14□□□□□ -2.07
SCFD1-209ENST00000553280 C1QBP02746 253 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 IGKV1-16P04430 117 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 METTL15P1P0C7V9 234 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 CASP1P29466 404 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 DEFA3P59666 94 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 YPEL3P61236 119 aaPredicted RBP2.14□□□□□ -2.07
SCFD1-209ENST00000553280 TMEM155Q4W5P6 130 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 LINC01554Q52M75 96 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 FAM173BQ6P4H8 233 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 SIGLECL1Q8N7X8 197 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 GINS4Q9BRT9 223 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 BAIAP2Q9UQB8 552 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 PTPRSQ13332 1948 aa2.14□□□□□ -2.07
SCFD1-209ENST00000553280 KIF13BQ9NQT8 1826 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 TRBV19A0A075B6N1 114 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 ATG12O94817 140 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 LCA10Q71F78 164 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 TRAPPC6BQ86SZ2 158 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 DHFR2Q86XF0 187 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 OR52R1Q8NGF1 315 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 PYCARDQ9ULZ3 195 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 RIC1Q4ADV7 1423 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 PLXNA3P51805 1871 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 MALRD1Q5VYJ5 2156 aa2.13□□□□□ -2.07
SCFD1-209ENST00000553280 ICE1Q9Y2F5 2266 aa2.12□□□□□ -2.07
SCFD1-209ENST00000553280 FMN1Q68DA7 1419 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms