RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 LILRB2Q8N423 598 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 TMEM217Q8N7C4 229 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 PHLDA1Q8WV24 401 aaPredicted RBP8.44□□□□□ -1.06
NEK3-204ENST00000552973 OR10C1Q96KK4 312 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 RARRES2Q99969 163 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 C6orf62Q9GZU0 229 aaPredicted RBP8.44□□□□□ -1.06
NEK3-204ENST00000552973 NXF2Q9GZY0 626 aaKnown RBP8.44□□□□□ -1.06
NEK3-204ENST00000552973 SMIM31A0A1B0GVY4 71 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 M0QYG6 137 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 DEFB4AO15263 64 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 PI3P19957 117 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
NEK3-204ENST00000552973 HSPE1P61604 102 aaKnown RBP8.43□□□□□ -1.06
NEK3-204ENST00000552973 ERHP84090 104 aaKnown RBP8.43□□□□□ -1.06
NEK3-204ENST00000552973 PRCDQ00LT1 54 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 FAM90A2PQ658T7 463 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 LEMD1Q68G75 181 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 LPCAT3Q6P1A2 487 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 TOMM20LQ6UXN7 152 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 ST8SIA2Q92186 375 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 CMTM3Q96MX0 182 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 TXN2Q99757 166 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 FBXL17Q9UF56 701 aa8.43□□□□□ -1.06
NEK3-204ENST00000552973 DFFBO76075 338 aa8.42□□□□□ -1.06
NEK3-204ENST00000552973 PGAM2P15259 253 aa8.42□□□□□ -1.06
NEK3-204ENST00000552973 CMC4P56277 68 aaPredicted RBP8.42□□□□□ -1.06
NEK3-204ENST00000552973 DEFB131AP59861 70 aa8.42□□□□□ -1.06
NEK3-204ENST00000552973 NCS1P62166 190 aa8.42□□□□□ -1.06
NEK3-204ENST00000552973 RPL11P62913 178 aaKnown RBP8.42□□□□□ -1.06
NEK3-204ENST00000552973 OR11H2Q8NH07 326 aa8.42□□□□□ -1.06
NEK3-204ENST00000552973 DNASE2O00115 360 aaPredicted RBP8.41□□□□□ -1.06
NEK3-204ENST00000552973 ST8SIA3O43173 380 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 HPGDSO60760 199 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 CA1P00915 261 aaPredicted RBP8.41□□□□□ -1.06
NEK3-204ENST00000552973 ATF4P18848 351 aaPredicted RBP8.41□□□□□ -1.06
NEK3-204ENST00000552973 ELK1P19419 428 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 RCVRNP35243 200 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 UCP3P55916 312 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 VBP1P61758 197 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 PAFAH1B2P68402 229 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 MLANAQ16655 118 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 ZNF114Q8NC26 417 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 DUSP18Q8NEJ0 188 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
NEK3-204ENST00000552973 FAM212BQ9NTI7 297 aaPredicted RBP8.41□□□□□ -1.06
NEK3-204ENST00000552973 PUS1Q9Y606 427 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEK3-204ENST00000552973 A0A087WXM4 84 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 A0A1B0GU03 582 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 TMEM50AO95807 157 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 IFNA17P01571 189 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 IGKV1-5P01602 117 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 APOA1P02647 267 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 SNCAP37840 140 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 ETV6P41212 452 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 NPBWR1P48145 328 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 SP6Q3SY56 376 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 SLC35G3Q8N808 338 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 GATAD1Q8WUU5 269 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 TP53RKQ96S44 253 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 MS4A6AQ9H2W1 248 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 VSIRQ9H7M9 311 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 SCPEP1Q9HB40 452 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 VCX3AQ9NNX9 186 aa8.4□□□□□ -1.06
NEK3-204ENST00000552973 MRPL36Q9P0J6 103 aaKnown RBP8.4□□□□□ -1.06
NEK3-204ENST00000552973 A0A0B4J293 547 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 FAM25AB3EWG3 89 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 FAM25CB3EWG5 89 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 FAM25GB3EWG6 89 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 IFNA4P05014 189 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 AKR1C2P52895 323 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 PPP5CP53041 499 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 PIGPP57054 158 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 TMEM187Q14656 261 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 RBMS2Q15434 407 aaKnown RBP8.39□□□□□ -1.07
NEK3-204ENST00000552973 ZNF600Q6ZNG1 722 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 FUNDC2Q9BWH2 189 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 KLK11Q9UBX7 282 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 RABAC1Q9UI14 185 aa8.39□□□□□ -1.07
NEK3-204ENST00000552973 C3orf85A0A1B0GTC6 90 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 CD3DP04234 171 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 RNASE2P10153 161 aaKnown RBP8.38□□□□□ -1.07
NEK3-204ENST00000552973 HOXA1P49639 335 aaPredicted RBP8.38□□□□□ -1.07
NEK3-204ENST00000552973 PRR20EP86478 221 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 PRR20CP86479 221 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 PRR20DP86480 221 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 PRR20BP86481 221 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 PRR20AP86496 221 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 TRIM16LQ309B1 348 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 RNASE10Q5GAN6 216 aaKnown RBP8.38□□□□□ -1.07
NEK3-204ENST00000552973 LGALS9CQ6DKI2 356 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 STHQ8IWL8 128 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 OR52I2Q8NH67 350 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 PDCD10Q9BUL8 212 aa8.38□□□□□ -1.07
NEK3-204ENST00000552973 A0A0G2JRQ6 117 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 P0C879 139 aa8.37□□□□□ -1.07
NEK3-204ENST00000552973 NPPCP23582 126 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms