RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 MARCH1Q8TCQ1 289 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 CD300LFQ8TDQ1 290 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 CACNG8Q8WXS5 425 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 MARC2Q969Z3 335 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 MRPL20Q9BYC9 149 aaKnown RBP6.31□□□□□ -1.4
PRKCH-203ENST00000552875 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 METTL1Q9UBP6 276 aaKnown RBP6.31□□□□□ -1.4
PRKCH-203ENST00000552875 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 FAT1Q14517 4588 aa6.31□□□□□ -1.4
PRKCH-203ENST00000552875 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.3□□□□□ -1.4
PRKCH-203ENST00000552875 IGKV1D-13A0A0B4J2D9 117 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 OR4C46A6NHA9 309 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 GPR31O00270 319 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 ST8SIA5O15466 376 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 B3GALNT1O75752 331 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 DHFRP00374 187 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 IGKV1-13P0DP09 117 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 GNRHRP30968 328 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 MC5RP33032 325 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 XGP55808 180 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-203ENST00000552875 EIF4EBP1Q13541 118 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-203ENST00000552875 TMEM128Q5BJH2 165 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 LAMTOR1Q6IAA8 161 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 SLC25A42Q86VD7 318 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 GPHB5Q86YW7 130 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 CCDC71LQ8N9Z2 235 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 Q8NAQ8 132 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 TMEM230Q96A57 120 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 RNF5Q99942 180 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 RTBDNQ9BSG5 229 aaPredicted RBP6.3□□□□□ -1.4
PRKCH-203ENST00000552875 ABHD14AQ9BUJ0 271 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 SLC2A9Q9NRM0 540 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 PIPOXQ9P0Z9 390 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 ZNF221Q9UK13 617 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 C14orf166Q9Y224 244 aaKnown RBP6.3□□□□□ -1.4
PRKCH-203ENST00000552875 SELENOKQ9Y6D0 94 aa6.3□□□□□ -1.4
PRKCH-203ENST00000552875 TRAV6A0A075B6T7 132 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 A0A0B4J293 547 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 SNRPGP15A8MWD9 76 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 H7C2Y5 167 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-203ENST00000552875 EDN2P20800 178 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 ZNF134P52741 427 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 FXYD4P59646 89 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 DEFA5Q01523 94 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 GLDNQ6ZMI3 551 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-203ENST00000552875 ZNF66Q6ZN08 573 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 ZNF818PQ6ZRF7 136 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 KCTD9Q7L273 389 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 ODF3L1Q8IXM7 274 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 CMTM1Q8IZ96 169 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 SLC5A7Q9GZV3 580 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 OR2D2Q9H210 308 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 FAM212BQ9NTI7 297 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-203ENST00000552875 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
PRKCH-203ENST00000552875 A0A0B4J2A0 478 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 PIGBOS1A0A0B4J2F0 54 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 IGHV4-28A0A0C4DH34 117 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 TMEM213A2RRL7 107 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 CRYM-AS1A6NIL9 109 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 A8MWP6 167 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 TSPAN4O14817 238 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 RAB29O14966 203 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 PROP1O75360 226 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SPDEFO95238 335 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 OR2C1O95371 312 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 OR4E1P0C645 316 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 MYOD1P15172 320 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 PGAM2P15259 253 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 S100GP29377 79 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 PIGPP57054 158 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SUPT4H1P63272 117 aaKnown RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 ODF3L2Q3SX64 289 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 ZNF833PQ6ZTB9 187 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 C15orf53Q8NAA6 179 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 CHAC2Q8WUX2 184 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SECTM1Q8WVN6 248 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 C5orf30Q96GV9 206 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 TSNAXQ99598 290 aaKnown RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 PHB2Q99623 299 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 HSD17B10Q99714 261 aaKnown RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 CHRDL1Q9BU40 450 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 GPN1Q9HCN4 374 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SDHAF2Q9NX18 166 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 MRPL27Q9P0M9 148 aaKnown RBP6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SHPKQ9UHJ6 478 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 FLVCR2Q9UPI3 526 aa6.28□□□□□ -1.4
PRKCH-203ENST00000552875 SAA2-SAA4A0A096LPE2 208 aa6.27□□□□□ -1.41
PRKCH-203ENST00000552875 C9orf170A2RU37 121 aa6.27□□□□□ -1.41
PRKCH-203ENST00000552875 RBFOX2O43251 390 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRKCH-203ENST00000552875 PGLYRP1O75594 196 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-203ENST00000552875 IFNA5P01569 189 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms