RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 UBAC2Q8NBM4 344 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 SCARB1Q8WTV0 552 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 PINX1Q96BK5 328 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 ZC4H2Q9NQZ6 224 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 GAR1Q9NY12 217 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 SORL1Q92673 2214 aa14.12□□□□□ -0.15
PRPF40B-216ENST00000552301 K7EIL1 84 aa14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 K7EIM0 57 aa14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 LYRM1O43325 122 aa14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 SMCO1Q147U7 214 aa14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 AARDQ4LEZ3 155 aa14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 BSCL2Q96G97 398 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 PRR25Q96S07 402 aa14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 WDR12Q9GZL7 423 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 HEYLQ9NQ87 328 aaPredicted RBP14.11□□□□□ -0.15
PRPF40B-216ENST00000552301 ZNF320A2RRD8 509 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 OR2T8A6NH00 312 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 CORTO00230 105 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 TGOLN2O43493 480 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 NXPH3O95157 252 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 MT-CO2P00403 227 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 NMSQ5H8A3 153 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 DEFB121Q5J5C9 76 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 SPSB3Q6PJ21 355 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 HAPLN4Q86UW8 402 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 GPHB5Q86YW7 130 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 OR1S1Q8NH92 325 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 DYNLRB2Q8TF09 96 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 ATP6V0BQ99437 205 aa14.1□□□□□ -0.15
PRPF40B-216ENST00000552301 LGALS9O00182 355 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 BTCP35070 178 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 MFAP4P55083 255 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 ZNF846Q147U1 533 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 ANKRD55Q3KP44 614 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 PALMDQ9NP74 551 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 FLVCR2Q9UPI3 526 aa14.09□□□□□ -0.15
PRPF40B-216ENST00000552301 A0A1B0GU03 582 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 IGLV1-51P01701 117 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 CSN3P07498 182 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 RNASE2P10153 161 aaKnown RBP14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 SPNP16150 400 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 HTR2BP41595 481 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 C4orf46Q504U0 113 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 LRTM2Q8N967 370 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 COQ8AQ8NI60 647 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 HIPK2Q9H2X6 1198 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 SIGLEC8Q9NYZ4 499 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 TMED3Q9Y3Q3 217 aa14.08□□□□□ -0.16
PRPF40B-216ENST00000552301 IGHV3-35A0A0C4DH35 117 aa14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 I3L2K1 104 aa14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 PLA2G10O15496 165 aa14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 NUPL2O15504 423 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 TNFRSF9Q07011 255 aa14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 IL34Q6ZMJ4 242 aa14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 SLC24A4Q8NFF2 622 aa14.07□□□□□ -0.16
PRPF40B-216ENST00000552301 C9orf170A2RU37 121 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 C2orf70A6NJV1 201 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 GNG7O60262 68 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 HOXB5P09067 269 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 OR4E1P0C645 316 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 GP9P14770 177 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 ANXA7P20073 488 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 OPRK1P41145 380 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 NPBWR1P48145 328 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 DHRS2Q13268 280 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 LCN12Q6JVE5 192 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 MZT2BQ6NZ67 158 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 LYG2Q86SG7 212 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 NOXA1Q86UR1 476 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 DUSP18Q8NEJ0 188 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 TXN2Q99757 166 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 C20orf85Q9H1P6 137 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 UFC1Q9Y3C8 167 aa14.06□□□□□ -0.16
PRPF40B-216ENST00000552301 RPS10-NUDT3A0A1W2PQS6 291 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 A8MWP6 167 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 SCGB2A1O75556 95 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 IGHV3-48P01763 117 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 FOLR2P14207 255 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 FCGR2BP31994 310 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 RELQ04864 619 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 DTD1Q8TEA8 209 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 HSPB7Q9UBY9 170 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 DNAH3Q8TD57 4116 aa14.05□□□□□ -0.16
PRPF40B-216ENST00000552301 IFNA10P01566 189 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 SLC25A6P12236 298 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 NPY1RP25929 384 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 BSXQ3C1V8 233 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 OR2K2Q8NGT1 345 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 TMEM190Q8WZ59 177 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 MARC2Q969Z3 335 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 CHRDL1Q9BU40 450 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 C20orf24Q9BUV8 137 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 ZNF436Q9C0F3 470 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 RBKSQ9H477 322 aa14.04□□□□□ -0.16
PRPF40B-216ENST00000552301 TGP01266 2768 aa14.03□□□□□ -0.16
PRPF40B-216ENST00000552301 FAM240BA0A1B0GVZ2 78 aa14.03□□□□□ -0.16
PRPF40B-216ENST00000552301 TMEM213A2RRL7 107 aa14.03□□□□□ -0.16
PRPF40B-216ENST00000552301 F8W735 103 aaPredicted RBP14.03□□□□□ -0.16
PRPF40B-216ENST00000552301 NDUFA4O00483 81 aa14.03□□□□□ -0.16
PRPF40B-216ENST00000552301 MED6O75586 246 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms