RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ZNF773Q6PK81 442 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 C19orf35Q6ZS72 473 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 Q75L30 129 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TCF24Q7RTU0 167 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 HSD17B13Q7Z5P4 300 aaPredicted RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 CROCCP2Q86T23 111 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 GID4Q8IVV7 300 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 CDH26Q8IXH8 852 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 PUSL1Q8N0Z8 303 aaKnown RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 C1orf158Q8N1D5 194 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 LRTM2Q8N967 370 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 GDPD1Q8N9F7 314 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 DRAXINQ8NBI3 349 aaPredicted RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 OR10K1Q8NGX5 313 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 VSTM2AQ8TAG5 236 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TNFAIP8L1Q8WVP5 186 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ACOT12Q8WYK0 555 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TLCD1Q96CP7 247 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 C5orf30Q96GV9 206 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ADTRPQ96IZ2 230 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 PRAC1Q96KF2 57 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 NEDD4LQ96PU5 975 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 RAB40CQ96S21 281 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 FEVQ99581 238 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TXN2Q99757 166 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 NIPSNAP1Q9BPW8 284 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 HOPXQ9BPY8 73 aaPredicted RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 RIBC2Q9H4K1 309 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ISG20L2Q9H9L3 353 aaKnown RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 THYN1Q9P016 225 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ABRACLQ9P1F3 81 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 XCL2Q9UBD3 114 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 MGAT4AQ9UM21 535 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 HLA-DRB4X5D2U9 266 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 IGKV1-6A0A0C4DH72 117 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 A0A0J9YXV3 536 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM212A6NML5 194 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 KNCNA6PVL3 124 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 FAM90A26D6RGX4 464 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 H3BN98 237 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 J3QRE1 110 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 M0R1X1 148 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 TNFRSF11BO00300 401 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 NUPL2O15504 423 aaKnown RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 RPP14O95059 124 aaKnown RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 CDRT1O95170 752 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 IGHV3-23P01764 117 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 HBE1P02100 147 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 SERPINE2P07093 398 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 OCM2P0CE71 109 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 OCMP0CE72 109 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 HTN3P15516 51 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 GATA1P15976 413 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 IGFBP3P17936 291 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 RAB3AP20336 220 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 CRYBB3P26998 211 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 NKX2-1P43699 371 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 RPL27AP46776 148 aaKnown RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 SERPINB10P48595 397 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 EMP1P54849 157 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 PAX9P55771 341 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 OR2B8PP59922 312 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 RPL37AP61513 92 aaKnown RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 B2MP61769 119 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 CBX3Q13185 183 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 CLINT1Q14677 625 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 GINS1Q14691 196 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 ATP6AP1Q15904 470 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 POU2AF1Q16633 256 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 RRN3P1Q2M238 152 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 ODF4Q2M2E3 257 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 ACTL10Q5JWF8 245 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 ADAMTSL4-AS1Q5T5F5 129 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 SPATA31B1PQ5VZV4 182 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 GLYATQ6IB77 296 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 IDO2Q6ZQW0 420 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 LRRTM1Q86UE6 522 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 GBGT1Q8N5D6 347 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 ANKRD42Q8N9B4 389 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 OR13C3Q8NGS6 347 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 NEK7Q8TDX7 302 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 DNAJC9Q8WXX5 260 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 FAM162AQ96A26 154 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 MCUR1Q96AQ8 359 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 NSL1Q96IY1 281 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 C16orf45Q96MC5 204 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 OPRPNQ99935 248 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 LINC00467Q9BRT7 94 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 GINS3Q9BRX5 216 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 CABLES2Q9BTV7 478 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 THTPAQ9BU02 230 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 TTTY10Q9BZA0 68 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 NXF2Q9GZY0 626 aaKnown RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 METTL9Q9H1A3 318 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 OR51E2Q9H255 320 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 RIMS4Q9H426 269 aaPredicted RBP1.46□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM231Q9H6L2 316 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 MAGIXQ9H6Y5 334 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM138Q9NPI0 162 aa1.46□□□□□ -2.18
PTCH1-223ENST00000551623 SAR1AQ9NR31 198 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms