RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 OR51G1Q8NGK1 321 aa16.79■□□□□ 0.28
PRDM4-205ENST00000550376 OR4A5Q8NH83 315 aa16.79■□□□□ 0.28
PRDM4-205ENST00000550376 CD69Q07108 199 aa16.79■□□□□ 0.28
PRDM4-205ENST00000550376 SEC14L6B5MCN3 397 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 IFNA1P01562 189 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 PLGLAQ15195 96 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 CST9LP1Q5W188 147 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 ZFP82Q8N141 532 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 UNKLQ9H9P5 680 aaKnown RBP16.78■□□□□ 0.28
PRDM4-205ENST00000550376 DPM3Q9P2X0 92 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 CRYBA1P05813 215 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 CRYGBP07316 175 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 PRTN3P24158 256 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 ATP5G3P48201 142 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 MFAP2P55001 183 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 TMEM144Q7Z5S9 345 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 PPP1R27Q86WC6 154 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 URGCP-MRPS24S4R325 110 aa16.78■□□□□ 0.28
PRDM4-205ENST00000550376 IGLC7A0M8Q6 106 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 IGHV4-39P01824 125 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 RAB31Q13636 194 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 SLC16A13Q7RTY0 426 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 OR11H6Q8NGC7 330 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 TVP23CQ96ET8 276 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 MISP3Q96FF7 219 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 SLC45A2Q9UMX9 530 aa16.77■□□□□ 0.28
PRDM4-205ENST00000550376 AMMECR1Q9Y4X0 333 aaPredicted RBP16.77■□□□□ 0.28
PRDM4-205ENST00000550376 A0A1W2PN81 502 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 VENTXO95231 258 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 IGHV2-5P01817 119 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 CHRNA7P36544 502 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 PRR20EP86478 221 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 PRR20CP86479 221 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 PRR20DP86480 221 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 PRR20BP86481 221 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 PRR20AP86496 221 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 HES1Q14469 280 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 MMDQ15546 238 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 MIR17HGQ75NE6 70 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 TEX45Q8NA69 505 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 NPIPB3Q92617 1050 aa16.77■□□□□ 0.27
PRDM4-205ENST00000550376 RPL27AP46776 148 aaKnown RBP16.76■□□□□ 0.27
PRDM4-205ENST00000550376 FAM78BQ5VT40 261 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 ZNF343Q6P1L6 599 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 PCP4L1A6NKN8 68 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 NPPCP23582 126 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 RPL29P47914 159 aaKnown RBP16.76■□□□□ 0.27
PRDM4-205ENST00000550376 ZNF90Q03938 601 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 SPNS3Q6ZMD2 512 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 NRGNQ92686 78 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 FAM103A1Q9BTL3 118 aaKnown RBP16.76■□□□□ 0.27
PRDM4-205ENST00000550376 DOK5Q9P104 306 aa16.76■□□□□ 0.27
PRDM4-205ENST00000550376 C11orf94C9JXX5 98 aa16.75■□□□□ 0.27
PRDM4-205ENST00000550376 RHEBQ15382 184 aa16.75■□□□□ 0.27
PRDM4-205ENST00000550376 MMD2Q8IY49 270 aa16.75■□□□□ 0.27
PRDM4-205ENST00000550376 FBN2P35556 2912 aa16.75■□□□□ 0.27
PRDM4-205ENST00000550376 HIST1H2BAQ96A08 127 aa16.75■□□□□ 0.27
PRDM4-205ENST00000550376 AURKAIP1Q9NWT8 199 aaPredicted RBP16.75■□□□□ 0.27
PRDM4-205ENST00000550376 M0R1W7 72 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 COMPP49747 757 aaPredicted RBP16.74■□□□□ 0.27
PRDM4-205ENST00000550376 C2CD4CQ8TF44 421 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 SMIM7Q9BQ49 75 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 GSX1Q9H4S2 264 aaPredicted RBP16.74■□□□□ 0.27
PRDM4-205ENST00000550376 OR2C1O95371 312 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 SNRPCP09234 159 aaKnown RBP16.74■□□□□ 0.27
PRDM4-205ENST00000550376 STAG3L2P0CL84 134 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 STAG3L3P0CL85 134 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 LMO4P61968 165 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 OR5T1Q8NG75 326 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 DERL1Q9BUN8 251 aa16.74■□□□□ 0.27
PRDM4-205ENST00000550376 ODF3BA8MYP8 253 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 OVOL3O00110 214 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 MORN5Q5VZ52 161 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 CFHR4Q92496 578 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 SLC25A33Q9BSK2 321 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 HOXB4P17483 251 aaPredicted RBP16.73■□□□□ 0.27
PRDM4-205ENST00000550376 SLC35E1Q96K37 410 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 PARLQ9H300 379 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 MLXQ9UH92 298 aa16.73■□□□□ 0.27
PRDM4-205ENST00000550376 CNIH1O95406 144 aa16.72■□□□□ 0.27
PRDM4-205ENST00000550376 RND2P52198 227 aa16.72■□□□□ 0.27
PRDM4-205ENST00000550376 TMEM37Q8WXS4 190 aa16.72■□□□□ 0.27
PRDM4-205ENST00000550376 DMRT1Q9Y5R6 373 aa16.72■□□□□ 0.27
PRDM4-205ENST00000550376 TEX22C9J3V5 150 aa16.72■□□□□ 0.27
PRDM4-205ENST00000550376 SRSF12Q8WXF0 261 aaKnown RBP16.72■□□□□ 0.27
PRDM4-205ENST00000550376 MANBALQ9NQG1 85 aa16.72■□□□□ 0.27
PRDM4-205ENST00000550376 YTHDF2Q9Y5A9 579 aaKnown RBP16.72■□□□□ 0.27
PRDM4-205ENST00000550376 USP9YO00507 2555 aaPredicted RBP16.72■□□□□ 0.27
PRDM4-205ENST00000550376 TRAV5A0A0B4J249 113 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 SUB1P53999 127 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRDM4-205ENST00000550376 RHOBP62745 196 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 PAX2Q02962 417 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 ADIRFQ15847 76 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 EAF1Q96JC9 268 aaPredicted RBP16.71■□□□□ 0.27
PRDM4-205ENST00000550376 UHRF2Q96PU4 802 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 SSX3Q99909 188 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 SDF2L1Q9HCN8 221 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
PRDM4-205ENST00000550376 MOSP00540 346 aa16.71■□□□□ 0.26
PRDM4-205ENST00000550376 PMS2P11Q13670 270 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms