RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 BSCL2Q96G97 398 aaPredicted RBP19.81■□□□□ 0.76
CPSF6-205ENST00000550075 SIGLEC8Q9NYZ4 499 aa19.81■□□□□ 0.76
CPSF6-205ENST00000550075 K7EIM0 57 aa19.8■□□□□ 0.76
CPSF6-205ENST00000550075 CORTO00230 105 aa19.8■□□□□ 0.76
CPSF6-205ENST00000550075 SPSB3Q6PJ21 355 aa19.8■□□□□ 0.76
CPSF6-205ENST00000550075 SCARB1Q8WTV0 552 aa19.8■□□□□ 0.76
CPSF6-205ENST00000550075 SORL1Q92673 2214 aa19.8■□□□□ 0.76
CPSF6-205ENST00000550075 LGALS9O00182 355 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 TGOLN2O43493 480 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 IGLV1-51P01701 117 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 PPP1R1AQ13522 171 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 SMCO1Q147U7 214 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 NMSQ5H8A3 153 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 LYZL2Q7Z4W2 148 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 PRR25Q96S07 402 aa19.79■□□□□ 0.76
CPSF6-205ENST00000550075 IGHV3-21A0A0B4J1V1 117 aa19.78■□□□□ 0.76
CPSF6-205ENST00000550075 CEBPZOSA8MTT3 80 aa19.78■□□□□ 0.76
CPSF6-205ENST00000550075 SFT2D2O95562 160 aa19.78■□□□□ 0.76
CPSF6-205ENST00000550075 Q56UQ5 140 aa19.78■□□□□ 0.76
CPSF6-205ENST00000550075 UBAC2Q8NBM4 344 aa19.78■□□□□ 0.76
CPSF6-205ENST00000550075 HEYLQ9NQ87 328 aaPredicted RBP19.78■□□□□ 0.76
CPSF6-205ENST00000550075 OR2T8A6NH00 312 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 MT-CO2P00403 227 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 CSN3P07498 182 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 MFAP4P55083 255 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 DEFB121Q5J5C9 76 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 IL34Q6ZMJ4 242 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 LRTM2Q8N967 370 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 PINX1Q96BK5 328 aaKnown RBP19.77■□□□□ 0.76
CPSF6-205ENST00000550075 PALMDQ9NP74 551 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 ZC4H2Q9NQZ6 224 aa19.77■□□□□ 0.76
CPSF6-205ENST00000550075 A0A1B0GU03 582 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 ZNF320A2RRD8 509 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 I3L2K1 104 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 LYRM1O43325 122 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 RNASE2P10153 161 aaKnown RBP19.76■□□□□ 0.75
CPSF6-205ENST00000550075 SPNP16150 400 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 BTCP35070 178 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 HTR2BP41595 481 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 DYNLRB2Q8TF09 96 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 TXN2Q99757 166 aa19.76■□□□□ 0.75
CPSF6-205ENST00000550075 WDR12Q9GZL7 423 aaKnown RBP19.76■□□□□ 0.75
CPSF6-205ENST00000550075 A8MWP6 167 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 ANKRD55Q3KP44 614 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 LCN12Q6JVE5 192 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 HAPLN4Q86UW8 402 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 OR2K2Q8NGT1 345 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 OR1S1Q8NH92 325 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 TMED3Q9Y3Q3 217 aa19.75■□□□□ 0.75
CPSF6-205ENST00000550075 C2orf70A6NJV1 201 aa19.74■□□□□ 0.75
CPSF6-205ENST00000550075 GP9P14770 177 aa19.74■□□□□ 0.75
CPSF6-205ENST00000550075 FCGR2BP31994 310 aaPredicted RBP19.74■□□□□ 0.75
CPSF6-205ENST00000550075 TNFRSF9Q07011 255 aa19.74■□□□□ 0.75
CPSF6-205ENST00000550075 HIPK2Q9H2X6 1198 aa19.74■□□□□ 0.75
CPSF6-205ENST00000550075 UFC1Q9Y3C8 167 aa19.74■□□□□ 0.75
CPSF6-205ENST00000550075 NUPL2O15504 423 aaKnown RBP19.73■□□□□ 0.75
CPSF6-205ENST00000550075 BSXQ3C1V8 233 aa19.73■□□□□ 0.75
CPSF6-205ENST00000550075 NOXA1Q86UR1 476 aa19.73■□□□□ 0.75
CPSF6-205ENST00000550075 ZNF436Q9C0F3 470 aaPredicted RBP19.73■□□□□ 0.75
CPSF6-205ENST00000550075 HSPB7Q9UBY9 170 aa19.73■□□□□ 0.75
CPSF6-205ENST00000550075 FLVCR2Q9UPI3 526 aa19.73■□□□□ 0.75
CPSF6-205ENST00000550075 TGP01266 2768 aa19.73■□□□□ 0.75
CPSF6-205ENST00000550075 C9orf170A2RU37 121 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 PLA2G10O15496 165 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 GNG7O60262 68 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 NXPH3O95157 252 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 SLC25A6P12236 298 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 NPBWR1P48145 328 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 ELLP55199 621 aaPredicted RBP19.72■□□□□ 0.75
CPSF6-205ENST00000550075 RELQ04864 619 aaPredicted RBP19.72■□□□□ 0.75
CPSF6-205ENST00000550075 ZNF846Q147U1 533 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 C4orf46Q504U0 113 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 PVRIGQ6DKI7 326 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 DUSP18Q8NEJ0 188 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 SLC24A4Q8NFF2 622 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 COQ8AQ8NI60 647 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 MARC2Q969Z3 335 aa19.72■□□□□ 0.75
CPSF6-205ENST00000550075 IGHV3-35A0A0C4DH35 117 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 RPS10-NUDT3A0A1W2PQS6 291 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 F8W735 103 aaPredicted RBP19.71■□□□□ 0.75
CPSF6-205ENST00000550075 NDUFA4O00483 81 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 SCGB2A1O75556 95 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 OR4E1P0C645 316 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 FOLR2P14207 255 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 LYG2Q86SG7 212 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 TMEM190Q8WZ59 177 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 C20orf85Q9H1P6 137 aa19.71■□□□□ 0.75
CPSF6-205ENST00000550075 TECRQ9NZ01 308 aaKnown RBP19.71■□□□□ 0.75
CPSF6-205ENST00000550075 TMEM213A2RRL7 107 aa19.7■□□□□ 0.74
CPSF6-205ENST00000550075 OPRK1P41145 380 aa19.7■□□□□ 0.74
CPSF6-205ENST00000550075 DHRS2Q13268 280 aa19.7■□□□□ 0.74
CPSF6-205ENST00000550075 DTD1Q8TEA8 209 aa19.7■□□□□ 0.74
CPSF6-205ENST00000550075 CHRDL1Q9BU40 450 aa19.7■□□□□ 0.74
CPSF6-205ENST00000550075 ANXA7P20073 488 aaKnown RBP19.69■□□□□ 0.74
CPSF6-205ENST00000550075 NPY1RP25929 384 aa19.69■□□□□ 0.74
CPSF6-205ENST00000550075 C2orf83Q53S99 150 aa19.69■□□□□ 0.74
CPSF6-205ENST00000550075 MZT2BQ6NZ67 158 aa19.69■□□□□ 0.74
CPSF6-205ENST00000550075 UNQ9165/PRO28630Q6UXU0 137 aa19.69■□□□□ 0.74
CPSF6-205ENST00000550075 FAM90A26D6RGX4 464 aa19.68■□□□□ 0.74
CPSF6-205ENST00000550075 IGHV3-48P01763 117 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms