RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CACNA1DQ01668 2161 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 ZCCHC11Q5TAX3 1644 aaKnown RBP1.4□□□□□ -2.18
CCDC38-208ENST00000549876 RALGAPA2Q2PPJ7 1873 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 TRAV38-1A0A0B4J264 116 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 G3V2T6 193 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 TSTD3H0UI37 97 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 C19orf84I3L1E1 186 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 J3QRK9 145 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 GPR31O00270 319 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 HMGB3O15347 200 aaKnown RBP1.4□□□□□ -2.19
CCDC38-208ENST00000549876 CREBL2O60519 120 aaPredicted RBP1.4□□□□□ -2.19
CCDC38-208ENST00000549876 NDUFC2O95298 119 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 IFNA14P01570 189 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 IGHV3-7P01780 117 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 MSMBP08118 114 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 TFPTP0C1Z6 253 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 SPI1P17947 270 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 HLA-DMBP28068 263 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 PHBP35232 272 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 TPI1P60174 286 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 PABPC1L2AQ5JQF8 200 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 SPANXN3Q5MJ09 141 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 Q6Q795 121 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 LYZL1Q6UWQ5 148 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 ZNF705AQ6ZN79 300 aaPredicted RBP1.4□□□□□ -2.19
CCDC38-208ENST00000549876 Q6ZS52 159 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 C12orf29Q8N999 325 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 OR5J2Q8NH18 312 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 SKA2Q8WVK7 121 aaPredicted RBP1.4□□□□□ -2.19
CCDC38-208ENST00000549876 IMMP2LQ96T52 175 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 OR8D2Q9GZM6 311 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 CYSLTR1Q9Y271 337 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 UTP11Q9Y3A2 253 aaKnown RBP1.4□□□□□ -2.19
CCDC38-208ENST00000549876 UFC1Q9Y3C8 167 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 DOCK6Q96HP0 2047 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 KIF1BO60333 1816 aa1.4□□□□□ -2.19
CCDC38-208ENST00000549876 MYH3P11055 1940 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 MYH2Q9UKX2 1941 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TRBV19A0A075B6N1 114 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TRAV4A0A0B4J268 109 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 MUC21A0A0G2JKD1 596 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 MUC21A0A140T8X8 626 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 LOC105371267A0A1B0GV96 52 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 GGT3PA6NGU5 568 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 SIGLEC16A6NMB1 481 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 E7EQL1 145 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 H7C1C5 153 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 ORC5O43913 435 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 PIAS1O75925 651 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 OR2J2O76002 312 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 BPGMP07738 259 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 LGALS1P09382 135 aaKnown RBP1.39□□□□□ -2.19
CCDC38-208ENST00000549876 NBEAP1P0C6P0 100 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 NFYAP23511 347 aaPredicted RBP1.39□□□□□ -2.19
CCDC38-208ENST00000549876 RPL28P46779 137 aaKnown RBP1.39□□□□□ -2.19
CCDC38-208ENST00000549876 LCN6P62502 163 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 RHOBP62745 196 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 FOXF1Q12946 379 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 SCGB2B2Q4G0G5 96 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TOMM20LQ6UXN7 152 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 ZNF767PQ75MW2 155 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 SLC35E3Q7Z769 313 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 SMIM20Q8N5G0 67 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TMEM35BQ8NCS4 154 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 SLC25A40Q8TBP6 338 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 MALSU1Q96EH3 234 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 C20orf166-AS1Q96NR2 134 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 C6orf62Q9GZU0 229 aaPredicted RBP1.39□□□□□ -2.19
CCDC38-208ENST00000549876 CHST6Q9GZX3 395 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 PBOV1Q9GZY1 135 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TUBA4BQ9H853 241 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 ACER3Q9NUN7 267 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TAS2R7Q9NYW3 318 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 PRNDQ9UKY0 176 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 HHLA3Q9XRX5 114 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 CCL26Q9Y258 94 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 NDUFAF1Q9Y375 327 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 HSPB11Q9Y547 144 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TIMM22Q9Y584 194 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 TIMM9Q9Y5J7 89 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 NYNRINQ9P2P1 1898 aaKnown RBP1.39□□□□□ -2.19
CCDC38-208ENST00000549876 FMN1Q68DA7 1419 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 MIA2Q96PC5 1412 aa1.39□□□□□ -2.19
CCDC38-208ENST00000549876 KIF13BQ9NQT8 1826 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 IGHV3-64A0A075B6Q5 118 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 TRAV7A0A075B6U4 112 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 FUOMA2VDF0 154 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 BUB1B-PAK6H3BSN5 160 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 H3BT86 120 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 ZNF73O43830 326 aaPredicted RBP1.38□□□□□ -2.19
CCDC38-208ENST00000549876 IFNA7P01567 189 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 APOA2P02652 100 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 HMGN1P05114 100 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 SMIM17P0DL12 118 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 SCGB1A1P11684 91 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 S100GP29377 79 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 CASP1P29466 404 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 CCR2P41597 374 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 EVX1P49640 407 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 ZNF80P51504 273 aaPredicted RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms