RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 LDLRAD2Q5SZI1 272 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 MIC13Q5XKP0 118 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 SLC35E4Q6ICL7 350 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 OR8G2PQ6IF36 304 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ZNF841Q6ZN19 808 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 SSX9Q7RTT3 188 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 CMTM1Q8IZ96 169 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 SPAG16Q8N0X2 631 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 HIST3H2BBQ8N257 126 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 C11orf42Q8N5U0 333 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 FAM216BQ8N7L0 139 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 CNEP1R1Q8N9A8 125 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 CCDC71LQ8N9Z2 235 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ZNF439Q8NDP4 499 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 DEFB108BQ8NET1 73 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 OR8G5Q8NG78 346 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 OR10G8Q8NGN5 311 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 OR10J5Q8NHC4 309 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 LRRC29Q8WV35 223 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 TAF15Q92804 592 aaKnown RBP eCLIP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 HIST1H2BHQ93079 126 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 IL22RA2Q969J5 263 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 LSM10Q969L4 123 aaKnown RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 S100PBPQ96BU1 408 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 MALSU1Q96EH3 234 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ZNF414Q96IQ9 312 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 PRAC1Q96KF2 57 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 GAFA1Q96PS6 74 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 CCL13Q99616 98 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 MGST2Q99735 147 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ATP5SQ99766 215 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 HIST1H2BNQ99877 126 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 HIST1H2BMQ99879 126 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ASCL2Q99929 193 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 PYGO2Q9BRQ0 406 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ATG101Q9BSB4 218 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 GGACTQ9BVM4 153 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 MRPL37Q9BZE1 423 aaKnown RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 SLC35B3Q9H1N7 401 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 OR2D2Q9H210 308 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 PRO1933Q9H354 126 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 SLC25A22Q9H936 323 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 PATZ1Q9HBE1 687 aaKnown RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 BIN3Q9NQY0 253 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 SMCO4Q9NRQ5 59 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 FAM212BQ9NTI7 297 aaPredicted RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 DOK5Q9P104 306 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 GNG13Q9P2W3 67 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 MLXQ9UH92 298 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 TRAPPC2LQ9UL33 140 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 PSG11Q9UQ72 335 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 KLF13Q9Y2Y9 288 aaPredicted RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 STRAPQ9Y3F4 350 aaKnown RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 YTHDF2Q9Y5A9 579 aaKnown RBP1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 MPC1Q9Y5U8 109 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 KPTNQ9Y664 436 aa1.88□□□□□ -2.11
DEPDC4-206ENST00000549100 ARHGAP32A7KAX9 2087 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CUL9Q8IWT3 2517 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 YLPM1P49750 1951 aaKnown RBP1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 BORCS7-ASMTA0A0B4J1R7 106 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 TRAV1-1A0A0B4J248 108 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 A0A1B0GU03 582 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 OR5B21A6NL26 309 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CEBPZOSA8MTT3 80 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 C1orf196B1AJZ1 125 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 KLRC4-KLRK1H3BQV0 150 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 K7EN84 100 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 M0R1B8 84 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 M0R1X1 148 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CORTO00230 105 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 SLC17A3O00476 420 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 SH2D1BO14796 132 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 RAB29O14966 203 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CEACAM4O75871 244 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CDK2AP2O75956 126 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 SNAPC5O75971 98 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 NXPH2O95156 264 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 FSTL3O95633 263 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CLDN1O95832 211 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 IGLV2-8P01709 118 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 IGHV1-46P01743 117 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 GYPAP02724 150 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 MT-ND4LP03901 98 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 PRSS1P07477 247 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 OR4A8P0C604 315 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 RNF224P0DH78 156 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CT45A6P0DMU7 189 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CT45A5P0DMU8 189 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CT45A7P0DMV0 189 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 BCL2P10415 239 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CCL3L1P16619 93 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 FGF7P21781 194 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CNTFRP26992 372 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 MDH2P40926 338 aaKnown RBP1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 CD200P41217 278 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 IER3P46695 156 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 GABRA2P47869 451 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 GNG10P50151 68 aa1.87□□□□□ -2.11
DEPDC4-206ENST00000549100 RND2P52198 227 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms