RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 DEFB4AO15263 64 aa14.97□□□□□ -0.01
SSH1-207ENST00000547862 ST8SIA3O43173 380 aa14.97□□□□□ -0.01
SSH1-207ENST00000547862 CA1P00915 261 aaPredicted RBP14.97□□□□□ -0.01
SSH1-207ENST00000547862 PRCDQ00LT1 54 aa14.97□□□□□ -0.01
SSH1-207ENST00000547862 ST8SIA2Q92186 375 aa14.97□□□□□ -0.01
SSH1-207ENST00000547862 OR10C1Q96KK4 312 aa14.97□□□□□ -0.01
SSH1-207ENST00000547862 NXF2Q9GZY0 626 aaKnown RBP14.97□□□□□ -0.01
SSH1-207ENST00000547862 M0QYG6 137 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 ATF4P18848 351 aaPredicted RBP14.96□□□□□ -0.01
SSH1-207ENST00000547862 RPL11P62913 178 aaKnown RBP14.96□□□□□ -0.01
SSH1-207ENST00000547862 LEMD1Q68G75 181 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 LPCAT3Q6P1A2 487 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 CADM3Q8N126 398 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 OR11H2Q8NH07 326 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 GPX8Q8TED1 209 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 YIPF6Q96EC8 236 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 GINS3Q9BRX5 216 aa14.96□□□□□ -0.01
SSH1-207ENST00000547862 DNASE2O00115 360 aaPredicted RBP14.95□□□□□ -0.02
SSH1-207ENST00000547862 APOHP02749 345 aaPredicted RBP14.95□□□□□ -0.02
SSH1-207ENST00000547862 PGAM2P15259 253 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 RCVRNP35243 200 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 ERHP84090 104 aaKnown RBP14.95□□□□□ -0.02
SSH1-207ENST00000547862 SLC35G3Q8N808 338 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 ZNF114Q8NC26 417 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 GATAD1Q8WUU5 269 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 TXN2Q99757 166 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 VCX3AQ9NNX9 186 aa14.95□□□□□ -0.02
SSH1-207ENST00000547862 SMIM31A0A1B0GVY4 71 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 PI3P19957 117 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 AKR1C2P52895 323 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 DEFB131AP59861 70 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 PAFAH1B2P68402 229 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 RBMS2Q15434 407 aaKnown RBP14.94□□□□□ -0.02
SSH1-207ENST00000547862 FAM90A2PQ658T7 463 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 TOMM20LQ6UXN7 152 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 C11orf45Q8TAV5 145 aa14.94□□□□□ -0.02
SSH1-207ENST00000547862 CMC4P56277 68 aaPredicted RBP14.93□□□□□ -0.02
SSH1-207ENST00000547862 HSPE1P61604 102 aaKnown RBP14.93□□□□□ -0.02
SSH1-207ENST00000547862 NCS1P62166 190 aa14.93□□□□□ -0.02
SSH1-207ENST00000547862 FAM24BQ8N5W8 94 aa14.93□□□□□ -0.02
SSH1-207ENST00000547862 MS4A6AQ9H2W1 248 aa14.93□□□□□ -0.02
SSH1-207ENST00000547862 FAM212BQ9NTI7 297 aaPredicted RBP14.93□□□□□ -0.02
SSH1-207ENST00000547862 RABAC1Q9UI14 185 aa14.93□□□□□ -0.02
SSH1-207ENST00000547862 PUS1Q9Y606 427 aaKnown RBP eCLIP14.93□□□□□ -0.02
SSH1-207ENST00000547862 HPGDSO60760 199 aa14.92□□□□□ -0.02
SSH1-207ENST00000547862 DFFBO76075 338 aa14.92□□□□□ -0.02
SSH1-207ENST00000547862 HOXA1P49639 335 aaPredicted RBP14.92□□□□□ -0.02
SSH1-207ENST00000547862 PPP5CP53041 499 aa14.92□□□□□ -0.02
SSH1-207ENST00000547862 LILRB2Q8N423 598 aa14.92□□□□□ -0.02
SSH1-207ENST00000547862 DUSP18Q8NEJ0 188 aa14.92□□□□□ -0.02
SSH1-207ENST00000547862 C11orf68Q9H3H3 251 aaKnown RBP14.92□□□□□ -0.02
SSH1-207ENST00000547862 SCPEP1Q9HB40 452 aa14.92□□□□□ -0.02
SSH1-207ENST00000547862 AGRNO00468 2067 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 IFNA17P01571 189 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 IFNA4P05014 189 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 SNCAP37840 140 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 NPBWR1P48145 328 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 ZNF600Q6ZNG1 722 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 PDCD10Q9BUL8 212 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 MFFQ9GZY8 342 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 ZFAND3Q9H8U3 227 aa14.91□□□□□ -0.02
SSH1-207ENST00000547862 FAM25AB3EWG3 89 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 FAM25CB3EWG5 89 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 FAM25GB3EWG6 89 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 IGKV1-5P01602 117 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 APOA1P02647 267 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 ELK1P19419 428 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 UCP3P55916 312 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 VBP1P61758 197 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 TMEM187Q14656 261 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 LGALS9CQ6DKI2 356 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 STXBP6Q8NFX7 210 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 RNASE11Q8TAA1 199 aaKnown RBP14.9□□□□□ -0.02
SSH1-207ENST00000547862 TP53RKQ96S44 253 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 VSIRQ9H7M9 311 aa14.9□□□□□ -0.02
SSH1-207ENST00000547862 A0A1B0GU03 582 aa14.89□□□□□ -0.03
SSH1-207ENST00000547862 PIGPP57054 158 aa14.89□□□□□ -0.03
SSH1-207ENST00000547862 TRIM16LQ309B1 348 aa14.89□□□□□ -0.03
SSH1-207ENST00000547862 STHQ8IWL8 128 aa14.89□□□□□ -0.03
SSH1-207ENST00000547862 A0A087WXM4 84 aa14.88□□□□□ -0.03
SSH1-207ENST00000547862 OPRK1P41145 380 aa14.88□□□□□ -0.03
SSH1-207ENST00000547862 RNASE10Q5GAN6 216 aaKnown RBP14.88□□□□□ -0.03
SSH1-207ENST00000547862 TMEM231Q9H6L2 316 aa14.88□□□□□ -0.03
SSH1-207ENST00000547862 ENY2Q9NPA8 101 aa14.88□□□□□ -0.03
SSH1-207ENST00000547862 RNASE2P10153 161 aaKnown RBP14.87□□□□□ -0.03
SSH1-207ENST00000547862 ETV6P41212 452 aa14.87□□□□□ -0.03
SSH1-207ENST00000547862 SP6Q3SY56 376 aa14.87□□□□□ -0.03
SSH1-207ENST00000547862 C2CD4CQ8TF44 421 aa14.87□□□□□ -0.03
SSH1-207ENST00000547862 FUNDC2Q9BWH2 189 aa14.87□□□□□ -0.03
SSH1-207ENST00000547862 MRPL36Q9P0J6 103 aaKnown RBP14.87□□□□□ -0.03
SSH1-207ENST00000547862 A0A0B4J293 547 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 TMEM50AO95807 157 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 CD5P06127 495 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 ZNF688P0C7X2 276 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 RND3P61587 244 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 METTL26Q96S19 204 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 KLK11Q9UBX7 282 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 DNAH10Q8IVF4 4471 aa14.86□□□□□ -0.03
SSH1-207ENST00000547862 A0A0G2JRQ6 117 aa14.85□□□□□ -0.03
SSH1-207ENST00000547862 C3orf85A0A1B0GTC6 90 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms