RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 HSPE1P61604 102 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-204ENST00000547637 TCF24Q7RTU0 167 aa16.97■□□□□ 0.31
SMARCD1-204ENST00000547637 TBC1D26Q86UD7 250 aa16.97■□□□□ 0.31
SMARCD1-204ENST00000547637 RPP25LQ8N5L8 163 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-204ENST00000547637 C11orf68Q9H3H3 251 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-204ENST00000547637 TMEM231Q9H6L2 316 aa16.97■□□□□ 0.31
SMARCD1-204ENST00000547637 ST8SIA3O43173 380 aa16.96■□□□□ 0.31
SMARCD1-204ENST00000547637 SCGB2A1O75556 95 aa16.96■□□□□ 0.31
SMARCD1-204ENST00000547637 RPL11P62913 178 aaKnown RBP16.96■□□□□ 0.31
SMARCD1-204ENST00000547637 TMEM187Q14656 261 aa16.96■□□□□ 0.31
SMARCD1-204ENST00000547637 SEC22AQ96IW7 307 aa16.96■□□□□ 0.31
SMARCD1-204ENST00000547637 VCX3AQ9NNX9 186 aa16.96■□□□□ 0.31
SMARCD1-204ENST00000547637 DBX1A6NMT0 343 aa16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 CA1P00915 261 aaPredicted RBP16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 RPS19P39019 145 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 SUB1P53999 127 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 ZNF124Q15973 351 aa16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 FAM90A2PQ658T7 463 aa16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 LYSMD2Q8IV50 215 aa16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 CENPSQ8N2Z9 138 aa16.95■□□□□ 0.3
SMARCD1-204ENST00000547637 IGHV3OR16-13A0A075B7E8 117 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 IGHV3-74A0A0B4J1X5 117 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 A0A1W2PS18 150 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 ATG12O94817 140 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 UCP3P55916 312 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 NANOS2P60321 138 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 KCTD21Q4G0X4 260 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 ZNF600Q6ZNG1 722 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 C2CD4CQ8TF44 421 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 PDCD10Q9BUL8 212 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 SCPEP1Q9HB40 452 aa16.94■□□□□ 0.3
SMARCD1-204ENST00000547637 TRAV2A0A0B4J234 112 aa16.93■□□□□ 0.3
SMARCD1-204ENST00000547637 CORTO00230 105 aa16.93■□□□□ 0.3
SMARCD1-204ENST00000547637 STHQ8IWL8 128 aa16.93■□□□□ 0.3
SMARCD1-204ENST00000547637 DEDDO75618 318 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 IGHV3-48P01763 117 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 TMEM41BQ5BJD5 291 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 TOMM20LQ6UXN7 152 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 SLC35G3Q8N808 338 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 GPX8Q8TED1 209 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 MRGPRFQ96AM1 343 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 NARS2Q96I59 477 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 MS4A6AQ9H2W1 248 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 VSIRQ9H7M9 311 aa16.92■□□□□ 0.3
SMARCD1-204ENST00000547637 C11orf94C9JXX5 98 aa16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 NPPCP23582 126 aa16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 RCVRNP35243 200 aa16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 DEFB131AP59861 70 aa16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 LSM3P62310 102 aaKnown RBP16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 ST8SIA2Q92186 375 aa16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 ENY2Q9NPA8 101 aa16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 PUS1Q9Y606 427 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMARCD1-204ENST00000547637 IFNA17P01571 189 aa16.9■□□□□ 0.3
SMARCD1-204ENST00000547637 TGFBR1P36897 503 aa16.9■□□□□ 0.3
SMARCD1-204ENST00000547637 COMMD3Q9UBI1 195 aa16.9■□□□□ 0.3
SMARCD1-204ENST00000547637 RABAC1Q9UI14 185 aa16.9■□□□□ 0.3
SMARCD1-204ENST00000547637 APOA1P02647 267 aa16.89■□□□□ 0.29
SMARCD1-204ENST00000547637 PGAM2P15259 253 aa16.89■□□□□ 0.29
SMARCD1-204ENST00000547637 LEMD1Q68G75 181 aa16.89■□□□□ 0.29
SMARCD1-204ENST00000547637 ZNF486Q96H40 463 aaPredicted RBP16.89■□□□□ 0.29
SMARCD1-204ENST00000547637 TMEM50AO95807 157 aa16.88■□□□□ 0.29
SMARCD1-204ENST00000547637 IGKV1-39P01597 117 aa16.88■□□□□ 0.29
SMARCD1-204ENST00000547637 IGKV1D-39P04432 117 aa16.88■□□□□ 0.29
SMARCD1-204ENST00000547637 AKR1C2P52895 323 aa16.88■□□□□ 0.29
SMARCD1-204ENST00000547637 SNX29P2Q8IUI4 249 aa16.88■□□□□ 0.29
SMARCD1-204ENST00000547637 METTL26Q96S19 204 aa16.88■□□□□ 0.29
SMARCD1-204ENST00000547637 INS-IGF2F8WCM5 200 aa16.87■□□□□ 0.29
SMARCD1-204ENST00000547637 EIF2B2P49770 351 aaKnown RBP16.87■□□□□ 0.29
SMARCD1-204ENST00000547637 MORN3Q6PF18 240 aaPredicted RBP16.87■□□□□ 0.29
SMARCD1-204ENST00000547637 TMEM230Q96A57 120 aa16.87■□□□□ 0.29
SMARCD1-204ENST00000547637 GRAMD2BQ96HH9 432 aa16.87■□□□□ 0.29
SMARCD1-204ENST00000547637 ZNF414Q96IQ9 312 aa16.87■□□□□ 0.29
SMARCD1-204ENST00000547637 IGHV3-66A0A0C4DH42 116 aa16.86■□□□□ 0.29
SMARCD1-204ENST00000547637 RND3P61587 244 aa16.86■□□□□ 0.29
SMARCD1-204ENST00000547637 SPINK9Q5DT21 86 aa16.86■□□□□ 0.29
SMARCD1-204ENST00000547637 HRH4Q9H3N8 390 aa16.86■□□□□ 0.29
SMARCD1-204ENST00000547637 A0A087WXM4 84 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 IGLL5B9A064 214 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 DEFB4AO15263 64 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 APOHP02749 345 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 SPP1P10451 314 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 MIFP14174 115 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 HOXA1P49639 335 aaPredicted RBP16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 PIGPP57054 158 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 STXBP6Q8NFX7 210 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 YIPF6Q96EC8 236 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 RRNAD1Q96FB5 475 aaKnown RBP16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 ZFAND3Q9H8U3 227 aa16.85■□□□□ 0.29
SMARCD1-204ENST00000547637 TRAV30A0A087WSZ9 112 aa16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 CLN5O75503 358 aa16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 OPRK1P41145 380 aa16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 TRIM16LQ309B1 348 aa16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 RNASE10Q5GAN6 216 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 LILRB2Q8N423 598 aa16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 RNASE11Q8TAA1 199 aaKnown RBP16.84■□□□□ 0.29
SMARCD1-204ENST00000547637 MZT2AQ6P582 158 aa16.83■□□□□ 0.28
SMARCD1-204ENST00000547637 CCDC71LQ8N9Z2 235 aa16.83■□□□□ 0.28
SMARCD1-204ENST00000547637 ZFAND1Q8TCF1 268 aa16.83■□□□□ 0.28
SMARCD1-204ENST00000547637 COPZ2Q9P299 210 aa16.83■□□□□ 0.28
SMARCD1-204ENST00000547637 C3orf85A0A1B0GTC6 90 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms