RNA–Protein interactions for RNA: ENST00000547566.5

HNRNPA1-205, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

TSL 1 (best)

Gene HNRNPA1, Length 1,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-205ENST00000547566 S100GP29377 79 aa11.83□□□□□ -0.52
HNRNPA1-205ENST00000547566 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
HNRNPA1-205ENST00000547566 LSM3P62310 102 aaKnown RBP11.83□□□□□ -0.52
HNRNPA1-205ENST00000547566 YIPF6Q96EC8 236 aa11.83□□□□□ -0.52
HNRNPA1-205ENST00000547566 CMTM3Q96MX0 182 aa11.83□□□□□ -0.52
HNRNPA1-205ENST00000547566 RARRES2Q99969 163 aa11.83□□□□□ -0.52
HNRNPA1-205ENST00000547566 GNG7O60262 68 aa11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 UCP3P55916 312 aa11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 TCF24Q7RTU0 167 aa11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 MRGPRFQ96AM1 343 aa11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 PINX1Q96BK5 328 aaKnown RBP11.82□□□□□ -0.52
HNRNPA1-205ENST00000547566 DEDDO75618 318 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 ERHP84090 104 aaKnown RBP11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 OR11H2Q8NH07 326 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 ST8SIA2Q92186 375 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 VSIRQ9H7M9 311 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
HNRNPA1-205ENST00000547566 APOA1P02647 267 aa11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 CD5P06127 495 aa11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 NANOS2P60321 138 aaKnown RBP11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 PAFAH1B2P68402 229 aa11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 LILRB2Q8N423 598 aa11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 COMMD3Q9UBI1 195 aa11.8□□□□□ -0.52
HNRNPA1-205ENST00000547566 SMIM31A0A1B0GVY4 71 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 RCVRNP35243 200 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 IZUMO4Q1ZYL8 232 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 SPINK9Q5DT21 86 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 SNX29P2Q8IUI4 249 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 DUSP18Q8NEJ0 188 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 C11orf45Q8TAV5 145 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 MFFQ9GZY8 342 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 ZFAND3Q9H8U3 227 aa11.79□□□□□ -0.52
HNRNPA1-205ENST00000547566 DFFBO76075 338 aa11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 TMEM50AO95807 157 aa11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 NPBWR1P48145 328 aa11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 RBMS2Q15434 407 aaKnown RBP11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 ZNF600Q6ZNG1 722 aa11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
HNRNPA1-205ENST00000547566 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 INS-IGF2F8WCM5 200 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 M0QYG6 137 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 IFNA4P05014 189 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 P0C879 139 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 ELK1P19419 428 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 SNCAP37840 140 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 DEFB131AP59861 70 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 RND3P61587 244 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 LEMD1Q68G75 181 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 FAM24BQ8N5W8 94 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 SLC35G3Q8N808 338 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
HNRNPA1-205ENST00000547566 A0A087WXM4 84 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 A0A0B4J293 547 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 A0A1B0GU03 582 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 DEFB4AO15263 64 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 NCS1P62166 190 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 TMEM187Q14656 261 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 ZNF486Q96H40 463 aaPredicted RBP11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 TP53RKQ96S44 253 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 HERC2O95714 4834 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 HECTD4Q9Y4D8 3996 aa11.76□□□□□ -0.53
HNRNPA1-205ENST00000547566 HPGDSO60760 199 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 IFNA17P01571 189 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 RNASE2P10153 161 aaKnown RBP11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 PGAM2P15259 253 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 PI3P19957 117 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 PIGPP57054 158 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 RPL11P62913 178 aaKnown RBP11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 LHFPL1Q86WI0 220 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 TMEM231Q9H6L2 316 aa11.75□□□□□ -0.53
HNRNPA1-205ENST00000547566 CORTO00230 105 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 NPPCP23582 126 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 AKR1C2P52895 323 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 SUB1P53999 127 aaKnown RBP eCLIP11.74□□□□□ -0.532e-40■■■■■ 29.4
HNRNPA1-205ENST00000547566 VBP1P61758 197 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 STHQ8IWL8 128 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 C2CD4CQ8TF44 421 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 KRTAP17-1Q9BYP8 105 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 MRPL36Q9P0J6 103 aaKnown RBP11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 RABAC1Q9UI14 185 aa11.74□□□□□ -0.53
HNRNPA1-205ENST00000547566 C3orf85A0A1B0GTC6 90 aa11.73□□□□□ -0.53
HNRNPA1-205ENST00000547566 A0A1W2PS18 150 aa11.73□□□□□ -0.53
HNRNPA1-205ENST00000547566 CLN5O75503 358 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms