RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 FAM25GB3EWG6 89 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 RORCP51449 518 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 AKR1C2P52895 323 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 CMC4P56277 68 aaPredicted RBP13.86□□□□□ -0.19
CHPT1-202ENST00000546490 RND3P61587 244 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 RNASE12Q5GAN4 147 aaKnown RBP13.86□□□□□ -0.19
CHPT1-202ENST00000546490 MZT2AQ6P582 158 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 ARRDC1Q8N5I2 433 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 TMEM217Q8N7C4 229 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 SLC35G3Q8N808 338 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 AP3S1Q92572 193 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 ZNF414Q96IQ9 312 aa13.86□□□□□ -0.19
CHPT1-202ENST00000546490 IGHV3-49A0A0A0MS15 119 aa13.85□□□□□ -0.19
CHPT1-202ENST00000546490 TRAV14DV4A0A0A6YYC5 116 aa13.85□□□□□ -0.19
CHPT1-202ENST00000546490 ATG12O94817 140 aa13.85□□□□□ -0.19
CHPT1-202ENST00000546490 IGHV3-48P01763 117 aa13.85□□□□□ -0.19
CHPT1-202ENST00000546490 ATF4P18848 351 aaPredicted RBP13.85□□□□□ -0.19
CHPT1-202ENST00000546490 PDCD10Q9BUL8 212 aa13.85□□□□□ -0.19
CHPT1-202ENST00000546490 MAP6D1Q9H9H5 199 aa13.85□□□□□ -0.19
CHPT1-202ENST00000546490 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 TBPP20226 339 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 SNCAP37840 140 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 NPBWR1P48145 328 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 TFPI2P48307 235 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 PIGPP57054 158 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 EWSR1Q01844 656 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHPT1-202ENST00000546490 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 LHFPL1Q86WI0 220 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 APRG1Q8IVJ8 170 aa13.84□□□□□ -0.19
CHPT1-202ENST00000546490 CORTO00230 105 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 CD5P06127 495 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 PI3P19957 117 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 PPP5CP53041 499 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 IZUMO4Q1ZYL8 232 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 DUSP18Q8NEJ0 188 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 TP53RKQ96S44 253 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 EXTL2Q9UBQ6 330 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 KLK11Q9UBX7 282 aa13.83□□□□□ -0.2
CHPT1-202ENST00000546490 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 LY6G6CO95867 125 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 IFNA17P01571 189 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 CD3DP04234 171 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 TRIM16LQ309B1 348 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 CEMP1Q6PRD7 247 aaPredicted RBP13.82□□□□□ -0.2
CHPT1-202ENST00000546490 TCF24Q7RTU0 167 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 CCDC71LQ8N9Z2 235 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 COPZ2Q9P299 210 aa13.82□□□□□ -0.2
CHPT1-202ENST00000546490 KLK5Q9Y337 293 aaPredicted RBP13.82□□□□□ -0.2
CHPT1-202ENST00000546490 C3orf85A0A1B0GTC6 90 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 INS-IGF2F8WCM5 200 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 ST8SIA3O43173 380 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 GABARAPO95166 117 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 P0C879 139 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
CHPT1-202ENST00000546490 SUB1P53999 127 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHPT1-202ENST00000546490 ZNF124Q15973 351 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 FAM90A2PQ658T7 463 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 TOMM20LQ6UXN7 152 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 GBGT1Q8N5D6 347 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 OR52I2Q8NH67 350 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 RNASE11Q8TAA1 199 aaKnown RBP13.81□□□□□ -0.2
CHPT1-202ENST00000546490 C15orf40Q8WUR7 153 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 GATAD1Q8WUU5 269 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 CSTL1Q9H114 145 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 MTFP1Q9UDX5 166 aa13.81□□□□□ -0.2
CHPT1-202ENST00000546490 MPTX1A8MV57 137 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 SCGB2A1O75556 95 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 ZNF182P17025 639 aaPredicted RBP13.8□□□□□ -0.2
CHPT1-202ENST00000546490 ZFAND1Q8TCF1 268 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 TMEM231Q9H6L2 316 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 VSIRQ9H7M9 311 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 ZFAND3Q9H8U3 227 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
CHPT1-202ENST00000546490 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHPT1-202ENST00000546490 A0A0B4J293 547 aa13.79□□□□□ -0.2
CHPT1-202ENST00000546490 B3GALNT1O75752 331 aa13.79□□□□□ -0.2
CHPT1-202ENST00000546490 TAS2R19P59542 299 aa13.79□□□□□ -0.2
CHPT1-202ENST00000546490 CTF1Q16619 201 aa13.79□□□□□ -0.2
CHPT1-202ENST00000546490 SCGB2B2Q4G0G5 96 aa13.79□□□□□ -0.2
CHPT1-202ENST00000546490 RRNAD1Q96FB5 475 aaKnown RBP13.79□□□□□ -0.2
CHPT1-202ENST00000546490 NAA50Q9GZZ1 169 aaKnown RBP13.79□□□□□ -0.2
CHPT1-202ENST00000546490 DNASE2O00115 360 aaPredicted RBP13.78□□□□□ -0.2
CHPT1-202ENST00000546490 RNASE2P10153 161 aaKnown RBP13.78□□□□□ -0.2
CHPT1-202ENST00000546490 UCP1P25874 307 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 OPRK1P41145 380 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 TMEM229BQ8NBD8 167 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 OR4D10Q8NGI6 311 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 OR13C8Q8NGS7 320 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 TERB2Q8NHR7 220 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 MS4A6AQ9H2W1 248 aa13.78□□□□□ -0.2
CHPT1-202ENST00000546490 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
CHPT1-202ENST00000546490 DFFBO76075 338 aa13.77□□□□□ -0.21
CHPT1-202ENST00000546490 RAB3DO95716 219 aa13.77□□□□□ -0.21
CHPT1-202ENST00000546490 CD74P04233 296 aa13.77□□□□□ -0.21
CHPT1-202ENST00000546490 RPL11P62913 178 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms