RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 PLET1Q6UQ28 207 aa9□□□□□ -0.97
YBX3-217ENST00000546164 SLC35G3Q8N808 338 aa9□□□□□ -0.97
YBX3-217ENST00000546164 ZNF436Q9C0F3 470 aaPredicted RBP9□□□□□ -0.97
YBX3-217ENST00000546164 CTNNBIP1Q9NSA3 81 aaPredicted RBP9□□□□□ -0.97
YBX3-217ENST00000546164 GAR1Q9NY12 217 aaKnown RBP9□□□□□ -0.97
YBX3-217ENST00000546164 CACFD1Q9UGQ2 172 aa9□□□□□ -0.97
YBX3-217ENST00000546164 STAB2Q8WWQ8 2551 aa9□□□□□ -0.97
YBX3-217ENST00000546164 A0A0B4J2A0 478 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 PIGBOS1A0A0B4J2F0 54 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 ANXA3P12429 323 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 FOLR2P14207 255 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 AKR1C4P17516 323 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 ELLP55199 621 aaPredicted RBP8.99□□□□□ -0.97
YBX3-217ENST00000546164 SPCS3P61009 180 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 CD69Q07108 199 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 BAK1Q16611 211 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 BSXQ3C1V8 233 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 TMEM128Q5BJH2 165 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 SPINK9Q5DT21 86 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 Q8N1Y9 231 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 GPR146Q96CH1 333 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 SDHCQ99643 169 aaPredicted RBP8.99□□□□□ -0.97
YBX3-217ENST00000546164 TXN2Q99757 166 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 ZC4H2Q9NQZ6 224 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 TECRQ9NZ01 308 aaKnown RBP8.99□□□□□ -0.97
YBX3-217ENST00000546164 CACNG5Q9UF02 275 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 SHPKQ9UHJ6 478 aa8.99□□□□□ -0.97
YBX3-217ENST00000546164 ZNF320A2RRD8 509 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 NAP1L6A6NFF2 107 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 OR2T8A6NH00 312 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 MT-CO2P00403 227 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 CTSGP08311 255 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 NHLRC4P0CG21 123 aaPredicted RBP8.98□□□□□ -0.97
YBX3-217ENST00000546164 C8orf88P0DMB2 117 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 RNASE2P10153 161 aaKnown RBP8.98□□□□□ -0.97
YBX3-217ENST00000546164 CBLN1P23435 193 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 ADMP35318 185 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 SNCAP37840 140 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 HOXA1P49639 335 aaPredicted RBP8.98□□□□□ -0.97
YBX3-217ENST00000546164 SMCPP49901 116 aaPredicted RBP8.98□□□□□ -0.97
YBX3-217ENST00000546164 MFAP4P55083 255 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 DEFB114Q30KQ6 69 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 CD300EQ496F6 205 aaPredicted RBP8.98□□□□□ -0.97
YBX3-217ENST00000546164 NMSQ5H8A3 153 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 TRIQKQ629K1 86 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 ZNF57Q68EA5 555 aaPredicted RBP8.98□□□□□ -0.97
YBX3-217ENST00000546164 UNQ9165/PRO28630Q6UXU0 137 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 LGI3Q8N145 548 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 DYNLRB2Q8TF09 96 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 TMEM190Q8WZ59 177 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 MISP3Q96FF7 219 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 CHRDL1Q9BU40 450 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 PALMDQ9NP74 551 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 UFC1Q9Y3C8 167 aa8.98□□□□□ -0.97
YBX3-217ENST00000546164 IGHV3-21A0A0B4J1V1 117 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 DUXBA0A1W2PPF3 345 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 IZUMO1RA6ND01 250 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 A8MZ25 164 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 CORTO00230 105 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 NDUFA4O00483 81 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 SULT1A3P0DMM9 295 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 SULT1A4P0DMN0 295 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 CCR6P51684 374 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 SUB1P53999 127 aaKnown RBP eCLIP8.97□□□□□ -0.97
YBX3-217ENST00000546164 RBMS2Q15434 407 aaKnown RBP8.97□□□□□ -0.97
YBX3-217ENST00000546164 Q56UQ5 140 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 LINC00299Q6ZSB3 139 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 TMED4Q7Z7H5 227 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 LRTM2Q8N967 370 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 ENY2Q9NPA8 101 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 PRR13Q9NZ81 148 aa8.97□□□□□ -0.97
YBX3-217ENST00000546164 NUPL2O15504 423 aaKnown RBP8.96□□□□□ -0.98
YBX3-217ENST00000546164 IL7P13232 177 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 EDN2P20800 178 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 HTR2BP41595 481 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 INPP1P49441 399 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 UBE2MP61081 183 aaKnown RBP8.96□□□□□ -0.98
YBX3-217ENST00000546164 TM4SF20Q53R12 229 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 LYZL2Q7Z4W2 148 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 CENPSQ8N2Z9 138 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 UBAC2Q8NBM4 344 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 UXS1Q8NBZ7 420 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 CACNG8Q8WXS5 425 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 ZNF414Q96IQ9 312 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 C7orf50Q9BRJ6 194 aaKnown RBP8.96□□□□□ -0.98
YBX3-217ENST00000546164 DAZ1Q9NQZ3 744 aaKnown RBP8.96□□□□□ -0.98
YBX3-217ENST00000546164 MRPL27Q9P0M9 148 aaKnown RBP8.96□□□□□ -0.98
YBX3-217ENST00000546164 MLXQ9UH92 298 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 TENM3Q9P273 2699 aa8.96□□□□□ -0.98
YBX3-217ENST00000546164 IGHV3-35A0A0C4DH35 117 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 A0A1B0GU03 582 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 ZNF785A8K8V0 405 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 K7EMT4 169 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 NDUFB6O95139 128 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 NPBWR1P48145 328 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 RELQ04864 619 aaPredicted RBP8.95□□□□□ -0.98
YBX3-217ENST00000546164 SMCO1Q147U7 214 aa8.95□□□□□ -0.98
YBX3-217ENST00000546164 GTSCR1Q86UQ5 136 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms