RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 UPK2O00526 184 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 HYPMO75409 117 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 IGKV3-15P01624 115 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 CA7P43166 264 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 PAX9P55771 341 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 BSPH1Q075Z2 132 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 ZNF585BQ52M93 769 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 ORAOV1Q8WV07 137 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 GRAMD2BQ96HH9 432 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 MRPL20Q9BYC9 149 aaKnown RBP4.8□□□□□ -1.64
VPS50-220ENST00000544910 MBNL3Q9NUK0 354 aaKnown RBP4.8□□□□□ -1.64
VPS50-220ENST00000544910 FOXA2Q9Y261 457 aaPredicted RBP4.8□□□□□ -1.64
VPS50-220ENST00000544910 UFC1Q9Y3C8 167 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 COL4A2P08572 1712 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 F5H697 171 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 CRYBB3P26998 211 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 SEC11AP67812 179 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 PLA2G2CQ5R387 149 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 LDLRAD2Q5SZI1 272 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 Q6ZRM9 215 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 MAP1LC3AQ9H492 121 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 GON4LQ3T8J9 2241 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 IGHV1-69-2A0A0G2JMI3 117 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 A0A1B0GWB2 263 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 NDUFS6O75380 124 aaKnown RBP4.8□□□□□ -1.64
VPS50-220ENST00000544910 CGAP01215 116 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 CENPWQ5EE01 88 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 MIR17HGQ75NE6 70 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 OR4X2Q8NGF9 303 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 OR1N2Q8NGR9 330 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 CYYR1Q96J86 154 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 UBTD1Q9HAC8 227 aa4.8□□□□□ -1.64
VPS50-220ENST00000544910 LINC00473A8K010 186 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 C1QTNF9BB2RNN3 333 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 CBLN1P23435 193 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 GPR183P32249 361 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 ERVK11-1P61568 191 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 HBBP68871 147 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 C10orf126Q8N4M7 172 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 IGHV3-72A0A0B4J1Y9 119 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TMEM189A5PLL7 270 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 ATXN7O15265 892 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 IGHV1-46P01743 117 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 SAA1P0DJI8 122 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 CKS2P33552 79 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 NUBP1P53384 320 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 SLC35B1P78383 322 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 MAJINQ3KP22 176 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 OR10J3Q5JRS4 329 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 ATOH7Q8N100 152 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TTC9CQ8N5M4 171 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 FGF23Q9GZV9 251 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 WDR83OSQ9Y284 106 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 ZNF257Q9Y2Q1 563 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 REG1AP05451 166 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 LMO1P25800 156 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 RND2P52198 227 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 HIST1H1AQ02539 215 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 FXYD3Q14802 87 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TCF24Q7RTU0 167 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 WNT10AQ9GZT5 417 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 MEGF9Q9H1U4 602 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TNFRSF19Q9NS68 423 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 IGKV1D-17A0A075B6S4 117 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 A0A1B0GW15 77 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 MBD3L4A6NDZ8 208 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 MBD3L3A6NE82 208 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 MBD3L5A6NJ08 208 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 CA1P00915 261 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 IGKV1-39P01597 117 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 IGKV1D-39P04432 117 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TIMP3P35625 211 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 SRSF6Q13247 344 aaKnown RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 HCP5Q6MZN7 132 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TREML4Q6UXN2 200 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 NUP37Q8NFH4 326 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 MBD3L2Q8NHZ7 208 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 MGST2Q99735 147 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 ANAPC13Q9BS18 74 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 NRN1Q9NPD7 142 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 MPDZO75970 2070 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 LOC389332A0A1B0GUA5 103 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 C17orf100A8MU93 164 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 B9A039 149 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 CCL21O00585 134 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 LGALS7P47929 136 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TMPRSS3P57727 454 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
VPS50-220ENST00000544910 PRCDQ00LT1 54 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 GCSAMLQ5JQS6 135 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TCF23Q7RTU1 214 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TEX29Q8N6K0 151 aa4.79□□□□□ -1.64
VPS50-220ENST00000544910 TRAV30A0A087WSZ9 112 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 RRHO14718 337 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 GNG7O60262 68 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 MMDQ15546 238 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 ADIPOQQ15848 244 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms