RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 I3L2K1 104 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 TGOLN2O43493 480 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 SULT1A3P0DMM9 295 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 SULT1A4P0DMN0 295 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 RNASE2P10153 161 aaKnown RBP16.57■□□□□ 0.24
OTUB1-212ENST00000543988 SNCAP37840 140 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 ADAMTSL5Q6ZMM2 481 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 GPHB5Q86YW7 130 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 ENY2Q9NPA8 101 aa16.57■□□□□ 0.24
OTUB1-212ENST00000543988 LGALS9O00182 355 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 PLA2G10O15496 165 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 NXPH3O95157 252 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 SFT2D2O95562 160 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 MT-CO2P00403 227 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 EDN2P20800 178 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 PLET1Q6UQ28 207 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 UBAC2Q8NBM4 344 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 CCDC32Q9BV29 185 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 SIGLEC8Q9NYZ4 499 aa16.56■□□□□ 0.24
OTUB1-212ENST00000543988 IGHV3-35A0A0C4DH35 117 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 IGHV3-48P01763 117 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 SMCO1Q147U7 214 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 DEFB121Q5J5C9 76 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 PVRIGQ6DKI7 326 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 C11orf87Q6NUJ2 197 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 UNQ9165/PRO28630Q6UXU0 137 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 PINX1Q96BK5 328 aaKnown RBP16.55■□□□□ 0.24
OTUB1-212ENST00000543988 BSCL2Q96G97 398 aaPredicted RBP16.55■□□□□ 0.24
OTUB1-212ENST00000543988 ATP6V0BQ99437 205 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 CHRDL1Q9BU40 450 aa16.55■□□□□ 0.24
OTUB1-212ENST00000543988 ZNF320A2RRD8 509 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 C2orf70A6NJV1 201 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 CEBPZOSA8MTT3 80 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 UBE2MP61081 183 aaKnown RBP16.54■□□□□ 0.24
OTUB1-212ENST00000543988 BSXQ3C1V8 233 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 FAM106AQ4KMX7 169 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 Q56UQ5 140 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 LRTM2Q8N967 370 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 S100ZQ8WXG8 99 aa16.54■□□□□ 0.24
OTUB1-212ENST00000543988 DUXBA0A1W2PPF3 345 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 TMEM213A2RRL7 107 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 A8MWP6 167 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 LYRM1O43325 122 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 GP9P14770 177 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 ADMP35318 185 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 SPSB3Q6PJ21 355 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 CACNG8Q8WXS5 425 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 HEYLQ9NQ87 328 aaPredicted RBP16.53■□□□□ 0.24
OTUB1-212ENST00000543988 BATF3Q9NR55 127 aa16.53■□□□□ 0.24
OTUB1-212ENST00000543988 LSM4Q9Y4Z0 139 aaKnown RBP16.53■□□□□ 0.24
OTUB1-212ENST00000543988 PIGBOS1A0A0B4J2F0 54 aa16.52■□□□□ 0.24
OTUB1-212ENST00000543988 A0A1B0GU03 582 aa16.52■□□□□ 0.24
OTUB1-212ENST00000543988 FOLR2P14207 255 aa16.52■□□□□ 0.24
OTUB1-212ENST00000543988 ANXA7P20073 488 aaKnown RBP16.52■□□□□ 0.24
OTUB1-212ENST00000543988 SUB1P53999 127 aaKnown RBP eCLIP16.52■□□□□ 0.24
OTUB1-212ENST00000543988 MFAP4P55083 255 aa16.52■□□□□ 0.24
OTUB1-212ENST00000543988 TNFRSF9Q07011 255 aa16.52■□□□□ 0.24
OTUB1-212ENST00000543988 ZNF436Q9C0F3 470 aaPredicted RBP16.52■□□□□ 0.24
OTUB1-212ENST00000543988 HSPB7Q9UBY9 170 aa16.52■□□□□ 0.24
OTUB1-212ENST00000543988 C9orf170A2RU37 121 aa16.51■□□□□ 0.23
OTUB1-212ENST00000543988 CTSGP08311 255 aa16.51■□□□□ 0.23
OTUB1-212ENST00000543988 FCGR2BP31994 310 aaPredicted RBP16.51■□□□□ 0.23
OTUB1-212ENST00000543988 DCTN2Q13561 401 aaKnown RBP16.51■□□□□ 0.23
OTUB1-212ENST00000543988 DYNLRB2Q8TF09 96 aa16.51■□□□□ 0.23
OTUB1-212ENST00000543988 TMEM190Q8WZ59 177 aa16.51■□□□□ 0.23
OTUB1-212ENST00000543988 CACFD1Q9UGQ2 172 aa16.51■□□□□ 0.23
OTUB1-212ENST00000543988 IZUMO1RA6ND01 250 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 HTR2BP41595 481 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 DHRS2Q13268 280 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 TM4SF20Q53R12 229 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 SLC24A4Q8NFF2 622 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 TMEM170AQ8WVE7 144 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 ZNF414Q96IQ9 312 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 TXN2Q99757 166 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 C20orf85Q9H1P6 137 aa16.5■□□□□ 0.23
OTUB1-212ENST00000543988 FNDC4Q9H6D8 234 aaPredicted RBP16.5■□□□□ 0.23
OTUB1-212ENST00000543988 GAR1Q9NY12 217 aaKnown RBP16.5■□□□□ 0.23
OTUB1-212ENST00000543988 CORTO00230 105 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 PITX3O75364 302 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 OR4E1P0C645 316 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 CBLN1P23435 193 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 CD300EQ496F6 205 aaPredicted RBP16.49■□□□□ 0.23
OTUB1-212ENST00000543988 LCN12Q6JVE5 192 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 LYG2Q86SG7 212 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 RBKSQ9H477 322 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 TMED3Q9Y3Q3 217 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 SORL1Q92673 2214 aa16.49■□□□□ 0.23
OTUB1-212ENST00000543988 NUPL2O15504 423 aaKnown RBP16.48■□□□□ 0.23
OTUB1-212ENST00000543988 HOXB5P09067 269 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 DEFB114Q30KQ6 69 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 C4orf46Q504U0 113 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 DTD1Q8TEA8 209 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 WDR12Q9GZL7 423 aaKnown RBP16.48■□□□□ 0.23
OTUB1-212ENST00000543988 PALMDQ9NP74 551 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 MRPL36Q9P0J6 103 aaKnown RBP16.48■□□□□ 0.23
OTUB1-212ENST00000543988 TBC1D24Q9ULP9 559 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 UFC1Q9Y3C8 167 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 SELENOKQ9Y6D0 94 aa16.48■□□□□ 0.23
OTUB1-212ENST00000543988 IGHV3OR16-8A0A075B7F1 116 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms