RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 MRPS15P82914 257 aaKnown RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 RELQ04864 619 aaPredicted RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 ARFRP1Q13795 201 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 USF2Q15853 346 aaPredicted RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 HSP90B2PQ58FF3 399 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 TTC32Q5I0X7 151 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 PSMG4Q5JS54 123 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 RPL22L1Q6P5R6 122 aaKnown RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 PQLC2Q6ZP29 291 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 KCTD9Q7L273 389 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 SYS1Q8N2H4 156 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 TSPAN14Q8NG11 270 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 VSTM2AQ8TAG5 236 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 TMEM167AQ8TBQ9 72 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 VN1R17PQ8TDU5 208 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 SCARB1Q8WTV0 552 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 TCTEX1D2Q8WW35 142 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 MAFIPQ8WZ33 124 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 DGCR14Q96DF8 476 aaKnown RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 NRBF2Q96F24 287 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 ZNF414Q96IQ9 312 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 RAB40CQ96S21 281 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 CIB1Q99828 191 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 CMSS1Q9BQ75 279 aaKnown RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 GINS4Q9BRT9 223 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 HINT2Q9BX68 163 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 C1QTNF4Q9BXJ3 329 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 TMEM59Q9BXS4 323 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 C21orf62Q9NYP8 219 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 SPATA2Q9UM82 520 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 PRELID3BQ9Y3B1 194 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 PAM16Q9Y3D7 125 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 YTHDF2Q9Y5A9 579 aaKnown RBP3.32□□□□□ -1.88
LIMS1-214ENST00000542845 RFNGQ9Y644 331 aa3.32□□□□□ -1.88
LIMS1-214ENST00000542845 TEX48A0A1B0GUV7 120 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 FABP7O15540 132 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 CD5P06127 495 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 CTSGP08311 255 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 DNAH10OSP0CZ25 163 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 SRMP19623 302 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 ASIPP42127 132 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 SERPINB10P48595 397 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 RPL30P62888 115 aaKnown RBP3.31□□□□□ -1.88
LIMS1-214ENST00000542845 MRPL28Q13084 256 aaKnown RBP3.31□□□□□ -1.88
LIMS1-214ENST00000542845 DHRS2Q13268 280 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 Q499Y3 187 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 TTC23Q5W5X9 447 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 KDM4DQ6B0I6 523 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 PUSL1Q8N0Z8 303 aaKnown RBP3.31□□□□□ -1.88
LIMS1-214ENST00000542845 ZFP41Q8N8Y5 198 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 OR4A4PQ8NGN8 299 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 TMEM18Q96B42 140 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 Q96MT0 163 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 C7orf50Q9BRJ6 194 aaKnown RBP3.31□□□□□ -1.88
LIMS1-214ENST00000542845 GINS3Q9BRX5 216 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 COMMD5Q9GZQ3 224 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 C12orf4Q9NQ89 552 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 GHRLQ9UBU3 117 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 MRPS7Q9Y2R9 242 aaKnown RBP3.31□□□□□ -1.88
LIMS1-214ENST00000542845 TNFRSF18Q9Y5U5 241 aa3.31□□□□□ -1.88
LIMS1-214ENST00000542845 PUS1Q9Y606 427 aaKnown RBP eCLIP3.31□□□□□ -1.88
LIMS1-214ENST00000542845 TRBV6-7A0A0A0MS04 114 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 A0A0A6YYD4 124 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 TRBV6-6A0A0A6YYG2 114 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 TRAV3A0A0B4J244 114 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 A0A0B4J293 547 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 IGLC7A0M8Q6 106 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 SMIM9A6NGZ8 99 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 SNTNA6NMZ2 147 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 K7EQG2 157 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 GNG7O60262 68 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 NDUFB4O95168 129 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 HRASP01112 189 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 SERPINE2P07093 398 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 CD37P11049 281 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 LINC00315P59091 139 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 TAS2R43P59537 309 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 OXA1LQ15070 435 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 RCN1Q15293 331 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 FCN2Q15485 313 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 KLK9Q2XQG4 91 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 TMEM69Q5SWH9 247 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 MEDAGQ5VYS4 303 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 GGNBP1Q5YKI7 109 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 TOMM20LQ6UXN7 152 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 AQP12AQ8IXF9 295 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 ARHGAP24Q8N264 748 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 CBR4Q8N4T8 237 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 OR52I1Q8NGK6 324 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 OR4S2Q8NH73 311 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 SLC25A46Q96AG3 418 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 MOB3AQ96BX8 217 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 ARHGAP5-AS1Q96IT6 56 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 OR10C1Q96KK4 312 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 PECRQ9BY49 303 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 Q9H3A6 140 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 FNDC4Q9H6D8 234 aaPredicted RBP3.3□□□□□ -1.88
LIMS1-214ENST00000542845 KLK9Q9UKQ9 250 aa3.3□□□□□ -1.88
LIMS1-214ENST00000542845 ARL2BPQ9Y2Y0 163 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms