RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 LINC00476Q8WZB0 136 aa10.57□□□□□ -0.72
COPS7A-212ENST00000541866 GINS3Q9BRX5 216 aa10.57□□□□□ -0.72
COPS7A-212ENST00000541866 NXF2Q9GZY0 626 aaKnown RBP10.57□□□□□ -0.72
COPS7A-212ENST00000541866 KLK5Q9Y337 293 aaPredicted RBP10.57□□□□□ -0.72
COPS7A-212ENST00000541866 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 FAM25AB3EWG3 89 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 FAM25CB3EWG5 89 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 FAM25GB3EWG6 89 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 HPGDSO60760 199 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 IGKV1-39P01597 117 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 IGKV1D-39P04432 117 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 ELK1P19419 428 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 FCGR2BP31994 310 aaPredicted RBP10.56□□□□□ -0.72
COPS7A-212ENST00000541866 RORCP51449 518 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 MZT2AQ6P582 158 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 GBGT1Q8N5D6 347 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 ZNF114Q8NC26 417 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 DUSP18Q8NEJ0 188 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 OR10C1Q96KK4 312 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 FUNDC2Q9BWH2 189 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 ALMS1Q8TCU4 4167 aa10.56□□□□□ -0.72
COPS7A-212ENST00000541866 MPTX1A8MV57 137 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 M0QYG6 137 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 ATG12O94817 140 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 IFNA17P01571 189 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 CD5P06127 495 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 NPBWR1P48145 328 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
COPS7A-212ENST00000541866 EWSR1Q01844 656 aaKnown RBP eCLIP10.55□□□□□ -0.72
COPS7A-212ENST00000541866 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 RNASE12Q5GAN4 147 aaKnown RBP10.55□□□□□ -0.72
COPS7A-212ENST00000541866 RNASE10Q5GAN6 216 aaKnown RBP10.55□□□□□ -0.72
COPS7A-212ENST00000541866 PDCD10Q9BUL8 212 aa10.55□□□□□ -0.72
COPS7A-212ENST00000541866 DNASE2O00115 360 aaPredicted RBP10.54□□□□□ -0.72
COPS7A-212ENST00000541866 ATF4P18848 351 aaPredicted RBP10.54□□□□□ -0.72
COPS7A-212ENST00000541866 PI3P19957 117 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 AKR1C2P52895 323 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 SUB1P53999 127 aaKnown RBP eCLIP10.54□□□□□ -0.72
COPS7A-212ENST00000541866 PIGPP57054 158 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 IZUMO4Q1ZYL8 232 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 SLC35G3Q8N808 338 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 AP3S1Q92572 193 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 ZNF486Q96H40 463 aaPredicted RBP10.54□□□□□ -0.72
COPS7A-212ENST00000541866 ENY2Q9NPA8 101 aa10.54□□□□□ -0.72
COPS7A-212ENST00000541866 ST8SIA3O43173 380 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 RND3P61587 244 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 ZNF124Q15973 351 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 TRIM16LQ309B1 348 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 FAM90A2PQ658T7 463 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 RNASE11Q8TAA1 199 aaKnown RBP10.53□□□□□ -0.72
COPS7A-212ENST00000541866 RARRES2Q99969 163 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 COPZ2Q9P299 210 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 KLK11Q9UBX7 282 aa10.53□□□□□ -0.72
COPS7A-212ENST00000541866 C3orf85A0A1B0GTC6 90 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 CORTO00230 105 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 ETV6P41212 452 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 ARRDC1Q8N5I2 433 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 CCDC71LQ8N9Z2 235 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 GATAD1Q8WUU5 269 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 RRNAD1Q96FB5 475 aaKnown RBP10.52□□□□□ -0.73
COPS7A-212ENST00000541866 ZNF414Q96IQ9 312 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 TP53RKQ96S44 253 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 TMEM231Q9H6L2 316 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 EXTL2Q9UBQ6 330 aa10.52□□□□□ -0.73
COPS7A-212ENST00000541866 PUS1Q9Y606 427 aaKnown RBP eCLIP10.52□□□□□ -0.73
COPS7A-212ENST00000541866 A0A0B4J293 547 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 IGHV3-66A0A0C4DH42 116 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 SCGB2A1O75556 95 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 TMEM50AO95807 157 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 CD3DP04234 171 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 ZNF182P17025 639 aaPredicted RBP10.51□□□□□ -0.73
COPS7A-212ENST00000541866 TBPP20226 339 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 NPPCP23582 126 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 HOXA1P49639 335 aaPredicted RBP10.51□□□□□ -0.73
COPS7A-212ENST00000541866 SP6Q3SY56 376 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 LHFPL1Q86WI0 220 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 C15orf40Q8WUR7 153 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
COPS7A-212ENST00000541866 ST8SIA2Q92186 375 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 MS4A6AQ9H2W1 248 aa10.51□□□□□ -0.73
COPS7A-212ENST00000541866 A0A1W2PS18 150 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 INS-IGF2F8WCM5 200 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 DFFBO76075 338 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 APOHP02749 345 aaPredicted RBP10.5□□□□□ -0.73
COPS7A-212ENST00000541866 PPP5CP53041 499 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 DEFB131AP59861 70 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 SCGB2B2Q4G0G5 96 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 TERB2Q8NHR7 220 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 TMEM230Q96A57 120 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 VSIRQ9H7M9 311 aa10.5□□□□□ -0.73
COPS7A-212ENST00000541866 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms