RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 LDLRAD2Q5SZI1 272 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 C9orf66Q5T8R8 295 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 KDM4DQ6B0I6 523 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 FAM53AQ6NSI3 398 aaPredicted RBP4.18□□□□□ -1.74
DDB1-219ENST00000541513 C19orf48Q6RUI8 117 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 IGFL3Q6UXB1 125 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 ZNF550Q7Z398 422 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 NAA40Q86UY6 237 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 RPS19BP1Q86WX3 136 aaKnown RBP4.18□□□□□ -1.74
DDB1-219ENST00000541513 ZCCHC24Q8N2G6 241 aaKnown RBP4.18□□□□□ -1.74
DDB1-219ENST00000541513 C11orf42Q8N5U0 333 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 FAM24BQ8N5W8 94 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 FDCSPQ8NFU4 85 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 OR52R1Q8NGF1 315 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 OR2K2Q8NGT1 345 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 OR2G3Q8NGZ4 309 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 GEMIN6Q8WXD5 167 aaKnown RBP4.18□□□□□ -1.74
DDB1-219ENST00000541513 S100ZQ8WXG8 99 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 DCUN1D4Q92564 292 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 ZNF524Q96C55 264 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 CNBD2Q96M20 576 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 PSMG3Q9BT73 122 aaPredicted RBP4.18□□□□□ -1.74
DDB1-219ENST00000541513 GABARAPL3Q9BY60 117 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 OR51I2Q9H344 312 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 SAR1AQ9NR31 198 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 RBFOX1Q9NWB1 397 aaKnown RBP4.18□□□□□ -1.74
DDB1-219ENST00000541513 HIVEP3Q5T1R4 2406 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 MED12Q93074 2177 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 NCKAP5O14513 1909 aa4.18□□□□□ -1.74
DDB1-219ENST00000541513 MYO18BQ8IUG5 2567 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 DIDO1Q9BTC0 2240 aaKnown RBP4.17□□□□□ -1.74
DDB1-219ENST00000541513 A0A1W2PP18 115 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 TMEM72A0PK05 275 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 BBIP1A8MTZ0 92 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 A8MXK9 166 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 J3KT08 172 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 YIF1AO95070 293 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 CPSF4O95639 269 aaKnown RBP4.17□□□□□ -1.74
DDB1-219ENST00000541513 TRBV12-3P01733 135 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 HBZP02008 142 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 OPN1SWP03999 348 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 PSG2P11465 335 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 CXCL2P19875 107 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 NPY1RP25929 384 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 IL2RGP31785 369 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 GLRXP35754 106 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 ETV6P41212 452 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 GABRA2P47869 451 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 LY6DQ14210 128 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 BATFQ16520 125 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 GSG1Q2KHT4 349 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 Q499Y3 187 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 ZNF506Q5JVG8 444 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 PCSK4Q6UW60 755 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 CLECL1Q8IZS7 167 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 VN1R17PQ8TDU5 208 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 NEURL3Q96EH8 262 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 ACY3Q96HD9 319 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 SIGLEC12Q96PQ1 595 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 TP53RKQ96S44 253 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 PRSS27Q9BQR3 290 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 SFXN3Q9BWM7 321 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 NANOGQ9H9S0 305 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 TAF9BQ9HBM6 251 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 CCDC167Q9P0B6 97 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 MRPL27Q9P0M9 148 aaKnown RBP4.17□□□□□ -1.74
DDB1-219ENST00000541513 SPTBN1Q01082 2364 aaKnown RBP4.17□□□□□ -1.74
DDB1-219ENST00000541513 ZNF462Q96JM2 2506 aa4.17□□□□□ -1.74
DDB1-219ENST00000541513 TRAV36DV7A0A075B6V5 113 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 A0A087WUU8 490 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 TRAV38-1A0A0B4J264 116 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 PGPA6NDG6 321 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 EEF1E1-BLOC1S5C9J1V9 151 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 EEF1E1O43324 174 aaKnown RBP4.16□□□□□ -1.74
DDB1-219ENST00000541513 ZNF354AO60765 605 aaPredicted RBP4.16□□□□□ -1.74
DDB1-219ENST00000541513 ARL6IP5O75915 188 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 AMBPP02760 352 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 HMGN2P05204 90 aaKnown RBP4.16□□□□□ -1.74
DDB1-219ENST00000541513 ATP5G1P05496 136 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 PFN1P07737 140 aaKnown RBP4.16□□□□□ -1.74
DDB1-219ENST00000541513 UCHL1P09936 223 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 HOXA5P20719 270 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 PPIBP23284 216 aaKnown RBP4.16□□□□□ -1.74
DDB1-219ENST00000541513 CDK2P24941 298 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 BRS3P32247 399 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 P2RX1P51575 399 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 SYNJ2BPP57105 145 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 TAS2R19P59542 299 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 EGFEM1PQ0D2K5 195 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 HERPUD1Q15011 391 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 TMEM241Q24JQ0 296 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 ZNF791Q3KP31 576 aaPredicted RBP4.16□□□□□ -1.74
DDB1-219ENST00000541513 MORN2Q502X0 79 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 PYY3Q5JQD4 70 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 NHLRC3Q5JS37 347 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 SPATA31B1PQ5VZV4 182 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 LCN12Q6JVE5 192 aa4.16□□□□□ -1.74
DDB1-219ENST00000541513 ARL9Q6T311 187 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms