RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 SHPKQ9UHJ6 478 aa9.94□□□□□ -0.82
LTBR-208ENST00000541005 NAP1L6A6NFF2 107 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 RNASE2P10153 161 aaKnown RBP9.93□□□□□ -0.82
LTBR-208ENST00000541005 HOXA1P49639 335 aaPredicted RBP9.93□□□□□ -0.82
LTBR-208ENST00000541005 ELLP55199 621 aaPredicted RBP9.93□□□□□ -0.82
LTBR-208ENST00000541005 SPINK9Q5DT21 86 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 ZNF57Q68EA5 555 aaPredicted RBP9.93□□□□□ -0.82
LTBR-208ENST00000541005 LINC00299Q6ZSB3 139 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 LGI3Q8N145 548 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 TMEM190Q8WZ59 177 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 TXN2Q99757 166 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 ZC4H2Q9NQZ6 224 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 TECRQ9NZ01 308 aaKnown RBP9.93□□□□□ -0.82
LTBR-208ENST00000541005 SMAD5-AS1Q9Y6J3 95 aa9.93□□□□□ -0.82
LTBR-208ENST00000541005 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 DUXBA0A1W2PPF3 345 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 OR2T8A6NH00 312 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 CORTO00230 105 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 C8orf88P0DMB2 117 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 FOLR2P14207 255 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 ADMP35318 185 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 SNCAP37840 140 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 UBE2MP61081 183 aaKnown RBP9.92□□□□□ -0.82
LTBR-208ENST00000541005 DEFB114Q30KQ6 69 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 UNQ9165/PRO28630Q6UXU0 137 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 TMED4Q7Z7H5 227 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 LRTM2Q8N967 370 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 MARC2Q969Z3 335 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 MISP3Q96FF7 219 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 C7orf50Q9BRJ6 194 aaKnown RBP9.92□□□□□ -0.82
LTBR-208ENST00000541005 PALMDQ9NP74 551 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 ENY2Q9NPA8 101 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 PRR13Q9NZ81 148 aa9.92□□□□□ -0.82
LTBR-208ENST00000541005 IGHV3-21A0A0B4J1V1 117 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 IZUMO1RA6ND01 250 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 A6NHS1 94 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 NDUFA4O00483 81 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 NDUFB6O95139 128 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 MT-CO2P00403 227 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CTSGP08311 255 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 IL7P13232 177 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CBLN1P23435 193 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 INPP1P49441 399 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CCR6P51684 374 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 SUB1P53999 127 aaKnown RBP eCLIP9.91□□□□□ -0.82
LTBR-208ENST00000541005 MFAP4P55083 255 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CD69Q07108 199 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CD300EQ496F6 205 aaPredicted RBP9.91□□□□□ -0.82
LTBR-208ENST00000541005 Q8N1Y9 231 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CENPSQ8N2Z9 138 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 DYNLRB2Q8TF09 96 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 ZNF414Q96IQ9 312 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 CHRDL1Q9BU40 450 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
LTBR-208ENST00000541005 ZNF320A2RRD8 509 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 A8MZ25 164 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 SFT2D2O95562 160 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 EDN2P20800 178 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 BTCP35070 178 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 HTR2BP41595 481 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 PPP1R1AQ13522 171 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 SMCO1Q147U7 214 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 ANKRD55Q3KP44 614 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 Q56UQ5 140 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 LYZL2Q7Z4W2 148 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 CACNG8Q8WXS5 425 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.82
LTBR-208ENST00000541005 HSPB7Q9UBY9 170 aa9.9□□□□□ -0.82
LTBR-208ENST00000541005 A0A1B0GU03 582 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 NUPL2O15504 423 aaKnown RBP9.89□□□□□ -0.83
LTBR-208ENST00000541005 PITX3O75364 302 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
LTBR-208ENST00000541005 SLC25A6P12236 298 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 VAMP1P23763 118 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 RELQ04864 619 aaPredicted RBP9.89□□□□□ -0.83
LTBR-208ENST00000541005 TNFRSF9Q07011 255 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 TM4SF20Q53R12 229 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 C2orf83Q53S99 150 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 UBAC2Q8NBM4 344 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 PINX1Q96BK5 328 aaKnown RBP9.89□□□□□ -0.83
LTBR-208ENST00000541005 CCDC32Q9BV29 185 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 MRPL27Q9P0M9 148 aaKnown RBP9.89□□□□□ -0.83
LTBR-208ENST00000541005 MLXQ9UH92 298 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 DNAH9Q9NYC9 4486 aa9.89□□□□□ -0.83
LTBR-208ENST00000541005 IGHV3-35A0A0C4DH35 117 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 C15orf62A8K5M9 175 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 ZNF785A8K8V0 405 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 CENPXA8MT69 81 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 K7EMT4 169 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 CNPY1Q3B7I2 92 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 GTSCR1Q86UQ5 136 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 UXS1Q8NBZ7 420 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 DUSP18Q8NEJ0 188 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 SLC24A4Q8NFF2 622 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 OR10C1Q96KK4 312 aa9.88□□□□□ -0.83
LTBR-208ENST00000541005 FNDC4Q9H6D8 234 aaPredicted RBP9.88□□□□□ -0.83
LTBR-208ENST00000541005 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms