RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 C1orf100Q5SVJ3 147 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 UBE2UQ5VVX9 321 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 KCTD9Q7L273 389 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 TCF24Q7RTU0 167 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 FAM89BQ8N5H3 189 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 FAM24BQ8N5W8 94 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 GDPD1Q8N9F7 314 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 RHOXF1Q8NHV9 184 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 SCARB1Q8WTV0 552 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 GRAMD2BQ96HH9 432 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 ZNF414Q96IQ9 312 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 PGLYRP3Q96LB9 341 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 DERL3Q96Q80 235 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CMSS1Q9BQ75 279 aaKnown RBP3.23□□□□□ -1.89
SNHG1-214ENST00000540865 NIPSNAP3BQ9BS92 247 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 URM1Q9BTM9 101 aaKnown RBP3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CENPOQ9BU64 300 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 C1QTNF4Q9BXJ3 329 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 LPAR5Q9H1C0 372 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 AMBNQ9NP70 447 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 FGF20Q9NP95 211 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-214ENST00000540865 CLEC5AQ9NY25 188 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 BET1LQ9NYM9 111 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 POMPQ9Y244 141 aa3.23□□□□□ -1.89
SNHG1-214ENST00000540865 IGHV3-49A0A0A0MS15 119 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 ERICH4A6NGS2 130 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 SMIM9A6NGZ8 99 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 KNCNA6PVL3 124 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 NUPL2O15504 423 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 ST8SIA3O43173 380 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 YIF1AO95070 293 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 LALBAP00709 142 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 HRASP01112 189 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 EIF4EP06730 217 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 SERPINE2P07093 398 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 CD37P11049 281 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 FCGR1AP12314 374 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 GNB3P16520 340 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 CD36P16671 472 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 MAPK3P27361 379 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 FGF9P31371 208 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 ETV1P50549 477 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 TAS2R43P59537 309 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 NUTF2P61970 127 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 RPL30P62888 115 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 Q56UQ5 140 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 TTC32Q5I0X7 151 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 OR2B11Q5JQS5 317 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 THOC7Q6I9Y2 204 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 SLC25A24Q6NUK1 477 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 ZNF705AQ6ZN79 300 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 HSD17B13Q7Z5P4 300 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 H1FOOQ8IZA3 346 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 CENPNQ96H22 339 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 ARHGAP5-AS1Q96IT6 56 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 HSD17B10Q99714 261 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 GINS4Q9BRT9 223 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 GINS3Q9BRX5 216 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 PECRQ9BY49 303 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 VSIRQ9H7M9 311 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 RBMX2Q9Y388 322 aaKnown RBP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 ORC6Q9Y5N6 252 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 PUS1Q9Y606 427 aaKnown RBP eCLIP3.22□□□□□ -1.89
SNHG1-214ENST00000540865 RFNGQ9Y644 331 aa3.22□□□□□ -1.89
SNHG1-214ENST00000540865 TNXBP22105 4242 aa3.21□□□□□ -1.89
SNHG1-214ENST00000540865 IGHV3OR16-13A0A075B7E8 117 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 IGHV3-21A0A0B4J1V1 117 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 IGHV3-74A0A0B4J1X5 117 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 IGLV5-39A0A0G2JS06 123 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 IRGMA1A4Y4 181 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF705FA8MVS1 300 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 K7EIM0 57 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 K7EQG2 157 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 HLA-DQB1P01920 261 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ALPLP05186 524 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 FCGR3AP08637 254 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF705DP0CH99 300 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF705BP0CI00 300 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 OR13C7P0DN81 318 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 HTN3P15516 51 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 GNRHRP30968 328 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 TNFSF8P32971 234 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ALDH3B2P48448 385 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 EMP1P54849 157 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 MFAP4P55083 255 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 CCL18P55774 89 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 BRWD1-AS2P59051 145 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 MRPS15P82914 257 aaKnown RBP3.21□□□□□ -1.9
SNHG1-214ENST00000540865 P2RY14Q15391 338 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 TIMM50Q3ZCQ8 353 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 DNAL1Q4LDG9 190 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 HSP90B2PQ58FF3 399 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ACTL10Q5JWF8 245 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 FAM222AQ5U5X8 452 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF773Q6PK81 442 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 Q6ZS49 121 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 LRRTM1Q86UE6 522 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ZFP41Q8N8Y5 198 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 UBAC2Q8NBM4 344 aa3.21□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF485Q8NCK3 441 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms